Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RFC5P40937 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.57■□□□□ 0.08
RFC5P40937 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 FXNP2-201ENST00000411625 547 ntBASIC15.57■□□□□ 0.08
RFC5P40937 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC15.57■□□□□ 0.08
RFC5P40937 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.57■□□□□ 0.08
RFC5P40937 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.57■□□□□ 0.08
RFC5P40937 GRPEL2P1-201ENST00000453145 339 ntBASIC15.57■□□□□ 0.08
RFC5P40937 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.57■□□□□ 0.08
RFC5P40937 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RFC5P40937 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.57■□□□□ 0.08
RFC5P40937 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.57■□□□□ 0.08
RFC5P40937 AP005264.5-201ENST00000590066 467 ntBASIC15.57■□□□□ 0.08
RFC5P40937 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.57■□□□□ 0.08
RFC5P40937 AP000322.3-201ENST00000608665 388 ntBASIC15.57■□□□□ 0.08
RFC5P40937 MIR6842-201ENST00000612539 65 ntBASIC15.57■□□□□ 0.08
RFC5P40937 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.57■□□□□ 0.08
RFC5P40937 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
RFC5P40937 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RFC5P40937 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.57■□□□□ 0.08
RFC5P40937 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RFC5P40937 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFC5P40937 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RFC5P40937 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC5P40937 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RFC5P40937 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.56■□□□□ 0.08
RFC5P40937 AK2P2-201ENST00000439142 405 ntBASIC15.56■□□□□ 0.08
RFC5P40937 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 RPL18AP3-201ENST00000462885 528 ntBASIC15.56■□□□□ 0.08
RFC5P40937 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC5P40937 AC135983.4-201ENST00000564116 1262 ntBASIC15.56■□□□□ 0.08
RFC5P40937 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC5P40937 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 AC092723.2-201ENST00000624955 793 ntBASIC15.56■□□□□ 0.08
RFC5P40937 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RFC5P40937 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC5P40937 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 AC138761.6-201ENST00000583997 1423 ntBASIC15.56■□□□□ 0.08
RFC5P40937 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC5P40937 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.56■□□□□ 0.08
RFC5P40937 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC5P40937 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC5P40937 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.56■□□□□ 0.08
RFC5P40937 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC5P40937 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC5P40937 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.56■□□□□ 0.08
RFC5P40937 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC5P40937 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.55■□□□□ 0.08
RFC5P40937 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC5P40937 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC5P40937 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFC5P40937 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC5P40937 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC5P40937 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.55■□□□□ 0.08
RFC5P40937 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC5P40937 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC5P40937 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC5P40937 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RFC5P40937 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms