Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRIM23P36406 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM23P36406 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM23P36406 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRIM23P36406 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 ODCP-201ENST00000459650 1639 ntBASIC13.87□□□□□ -0.19
TRIM23P36406 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.87□□□□□ -0.19
TRIM23P36406 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TRIM23P36406 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM23P36406 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRIM23P36406 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM23P36406 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRIM23P36406 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM23P36406 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 LYPLA2P1-203ENST00000447689 696 ntBASIC13.87□□□□□ -0.19
TRIM23P36406 RN7SL8P-201ENST00000461771 266 ntBASIC13.87□□□□□ -0.19
TRIM23P36406 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM23P36406 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRIM23P36406 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.87□□□□□ -0.19
TRIM23P36406 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM23P36406 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM23P36406 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 MIR6858-201ENST00000620733 67 ntBASIC13.87□□□□□ -0.19
TRIM23P36406 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.87□□□□□ -0.19
TRIM23P36406 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM23P36406 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM23P36406 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRIM23P36406 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM23P36406 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM23P36406 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 AC092573.1-201ENST00000433054 884 ntBASIC13.86□□□□□ -0.19
TRIM23P36406 AC253536.4-201ENST00000440539 267 ntBASIC13.86□□□□□ -0.19
TRIM23P36406 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM23P36406 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM23P36406 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM23P36406 CR383656.3-201ENST00000551315 183 ntBASIC13.86□□□□□ -0.19
TRIM23P36406 KRT8P2-201ENST00000556193 944 ntBASIC13.86□□□□□ -0.19
TRIM23P36406 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
TRIM23P36406 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.86□□□□□ -0.19
TRIM23P36406 AP003419.4-201ENST00000616071 517 ntBASIC13.86□□□□□ -0.19
TRIM23P36406 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM23P36406 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRIM23P36406 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM23P36406 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TRIM23P36406 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM23P36406 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 AC061965.1-201ENST00000560524 1465 ntBASIC13.86□□□□□ -0.19
TRIM23P36406 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRIM23P36406 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM23P36406 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 AL157996.1-201ENST00000624684 2299 ntBASIC13.85□□□□□ -0.19
TRIM23P36406 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.85□□□□□ -0.19
TRIM23P36406 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRIM23P36406 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRIM23P36406 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM23P36406 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM23P36406 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms