Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC026120.2-201ENST00000617239 309 ntBASIC17.17■□□□□ 0.34
PDE6BP35913 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.17■□□□□ 0.34
PDE6BP35913 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.17■□□□□ 0.34
PDE6BP35913 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PDE6BP35913 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.16■□□□□ 0.34
PDE6BP35913 AC144831.1-201ENST00000573312 2656 ntBASIC17.16■□□□□ 0.34
PDE6BP35913 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDE6BP35913 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 AC023157.3-201ENST00000619086 2088 ntBASIC17.16■□□□□ 0.34
PDE6BP35913 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDE6BP35913 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 Z98885.3-201ENST00000624882 1757 ntBASIC17.16■□□□□ 0.34
PDE6BP35913 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC17.16■□□□□ 0.34
PDE6BP35913 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 ALG1L15P-201ENST00000482834 794 ntBASIC17.16■□□□□ 0.34
PDE6BP35913 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PDE6BP35913 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.16■□□□□ 0.34
PDE6BP35913 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC17.16■□□□□ 0.34
PDE6BP35913 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC17.16■□□□□ 0.34
PDE6BP35913 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC17.16■□□□□ 0.34
PDE6BP35913 AC245369.7-201ENST00000631386 350 ntBASIC17.16■□□□□ 0.34
PDE6BP35913 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC17.16■□□□□ 0.34
PDE6BP35913 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.16■□□□□ 0.34
PDE6BP35913 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.16■□□□□ 0.34
PDE6BP35913 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
PDE6BP35913 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6BP35913 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17.15■□□□□ 0.34
PDE6BP35913 AC104640.1-201ENST00000562617 2109 ntBASIC17.15■□□□□ 0.34
PDE6BP35913 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.15■□□□□ 0.34
PDE6BP35913 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC17.15■□□□□ 0.34
PDE6BP35913 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC17.15■□□□□ 0.34
PDE6BP35913 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 CCND3P1-201ENST00000438347 580 ntBASIC17.15■□□□□ 0.34
PDE6BP35913 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.15■□□□□ 0.34
PDE6BP35913 PEBP1P3-201ENST00000455475 548 ntBASIC17.15■□□□□ 0.34
PDE6BP35913 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.15■□□□□ 0.34
PDE6BP35913 GRAMD4P6-201ENST00000556999 244 ntBASIC17.15■□□□□ 0.34
PDE6BP35913 AC132812.1-201ENST00000583145 892 ntBASIC17.15■□□□□ 0.34
PDE6BP35913 AC090510.3-201ENST00000615831 821 ntBASIC17.15■□□□□ 0.34
PDE6BP35913 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC17.15■□□□□ 0.34
PDE6BP35913 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PDE6BP35913 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PDE6BP35913 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6BP35913 AC008620.2-201ENST00000510294 1569 ntBASIC17.15■□□□□ 0.34
PDE6BP35913 AC064850.1-201ENST00000413279 1398 ntBASIC17.15■□□□□ 0.34
PDE6BP35913 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PDE6BP35913 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PDE6BP35913 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PDE6BP35913 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PDE6BP35913 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.14■□□□□ 0.34
PDE6BP35913 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.14■□□□□ 0.34
PDE6BP35913 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.14■□□□□ 0.33
PDE6BP35913 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDE6BP35913 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.14■□□□□ 0.33
PDE6BP35913 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDE6BP35913 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6BP35913 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDE6BP35913 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms