Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP6P35125 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC18.55■□□□□ 0.56
USP6P35125 SERBP1P2-201ENST00000436888 1164 ntBASIC18.55■□□□□ 0.56
USP6P35125 MTHFD2P7-201ENST00000483867 983 ntBASIC18.55■□□□□ 0.56
USP6P35125 RN7SL523P-201ENST00000484401 298 ntBASIC18.55■□□□□ 0.56
USP6P35125 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6P35125 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6P35125 PIGCP1-201ENST00000527583 895 ntBASIC18.55■□□□□ 0.56
USP6P35125 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC18.55■□□□□ 0.56
USP6P35125 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC18.55■□□□□ 0.56
USP6P35125 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC18.55■□□□□ 0.56
USP6P35125 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC18.55■□□□□ 0.56
USP6P35125 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.55■□□□□ 0.56
USP6P35125 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6P35125 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
USP6P35125 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC18.55■□□□□ 0.56
USP6P35125 PRR20FP-201ENST00000603320 180 ntBASIC18.55■□□□□ 0.56
USP6P35125 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP6P35125 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6P35125 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC18.55■□□□□ 0.56
USP6P35125 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
USP6P35125 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
USP6P35125 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP6P35125 DDC-212ENST00000615193 1674 ntTSL 3 BASIC18.55■□□□□ 0.56
USP6P35125 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.55■□□□□ 0.56
USP6P35125 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
USP6P35125 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6P35125 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6P35125 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6P35125 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC18.54■□□□□ 0.56
USP6P35125 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 AC004923.3-201ENST00000527532 355 ntBASIC18.54■□□□□ 0.56
USP6P35125 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6P35125 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC18.54■□□□□ 0.56
USP6P35125 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC18.54■□□□□ 0.56
USP6P35125 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
USP6P35125 MIR6816-201ENST00000620368 66 ntBASIC18.54■□□□□ 0.56
USP6P35125 CR392039.2-201ENST00000623182 509 ntBASIC18.54■□□□□ 0.56
USP6P35125 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6P35125 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6P35125 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC18.54■□□□□ 0.56
USP6P35125 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP6P35125 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USP6P35125 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
USP6P35125 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6P35125 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 SNORD23-201ENST00000408876 110 ntBASIC18.53■□□□□ 0.56
USP6P35125 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC18.53■□□□□ 0.56
USP6P35125 BRI3P1-201ENST00000440440 378 ntBASIC18.53■□□□□ 0.56
USP6P35125 AC093700.1-201ENST00000503348 717 ntBASIC18.53■□□□□ 0.56
USP6P35125 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP6P35125 RN7SL524P-201ENST00000581152 300 ntBASIC18.53■□□□□ 0.56
USP6P35125 FTLP5-201ENST00000586853 534 ntBASIC18.53■□□□□ 0.56
USP6P35125 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC18.53■□□□□ 0.56
USP6P35125 SNORA50D-202ENST00000627561 132 ntBASIC18.53■□□□□ 0.56
USP6P35125 AC245369.7-201ENST00000631386 350 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms