Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.25□□□□□ -0.29
NR4A1P22736 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.25□□□□□ -0.29
NR4A1P22736 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.25□□□□□ -0.29
NR4A1P22736 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 U91328.1-201ENST00000437528 223 ntBASIC13.25□□□□□ -0.29
NR4A1P22736 AC012441.1-201ENST00000446669 685 ntBASIC13.25□□□□□ -0.29
NR4A1P22736 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.25□□□□□ -0.29
NR4A1P22736 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NR4A1P22736 AC022137.2-201ENST00000503482 481 ntBASIC13.25□□□□□ -0.29
NR4A1P22736 USP32P1-208ENST00000506594 1164 ntBASIC13.25□□□□□ -0.29
NR4A1P22736 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.25□□□□□ -0.29
NR4A1P22736 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.25□□□□□ -0.29
NR4A1P22736 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.25□□□□□ -0.29
NR4A1P22736 AC233724.13-201ENST00000598383 410 ntBASIC13.25□□□□□ -0.29
NR4A1P22736 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.25□□□□□ -0.29
NR4A1P22736 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NR4A1P22736 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A1P22736 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 POM121L14P-201ENST00000406100 1558 ntBASIC13.24□□□□□ -0.29
NR4A1P22736 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A1P22736 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A1P22736 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A1P22736 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 AC005229.1-201ENST00000392885 409 ntBASIC13.24□□□□□ -0.29
NR4A1P22736 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.24□□□□□ -0.29
NR4A1P22736 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.24□□□□□ -0.29
NR4A1P22736 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 AC114812.1-204ENST00000449669 728 ntBASIC13.24□□□□□ -0.29
NR4A1P22736 KRT18P25-201ENST00000508931 1278 ntBASIC13.24□□□□□ -0.29
NR4A1P22736 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.24□□□□□ -0.29
NR4A1P22736 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.24□□□□□ -0.29
NR4A1P22736 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A1P22736 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 AL022328.1-201ENST00000610050 478 ntBASIC13.24□□□□□ -0.29
NR4A1P22736 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.24□□□□□ -0.29
NR4A1P22736 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.24□□□□□ -0.29
NR4A1P22736 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A1P22736 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NR4A1P22736 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.24□□□□□ -0.29
NR4A1P22736 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms