Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
RAB4AP20338 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
RAB4AP20338 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB4AP20338 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.9□□□□□ -0.66
RAB4AP20338 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB4AP20338 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.9□□□□□ -0.66
RAB4AP20338 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.9□□□□□ -0.66
RAB4AP20338 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.9□□□□□ -0.66
RAB4AP20338 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.9□□□□□ -0.66
RAB4AP20338 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 AL133215.2-201ENST00000609242 977 ntBASIC10.9□□□□□ -0.66
RAB4AP20338 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB4AP20338 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 MIR6069-201ENST00000620069 79 ntBASIC10.9□□□□□ -0.66
RAB4AP20338 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
RAB4AP20338 AF228730.6-201ENST00000641497 218 ntBASIC10.9□□□□□ -0.66
RAB4AP20338 AC084121.3-201ENST00000641716 218 ntBASIC10.9□□□□□ -0.66
RAB4AP20338 AC092902.6-201ENST00000641783 218 ntBASIC10.9□□□□□ -0.66
RAB4AP20338 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB4AP20338 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
RAB4AP20338 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC10.9□□□□□ -0.66
RAB4AP20338 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
RAB4AP20338 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RAB4AP20338 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RAB4AP20338 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RAB4AP20338 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RAB4AP20338 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RAB4AP20338 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
RAB4AP20338 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RAB4AP20338 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
RAB4AP20338 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC10.9□□□□□ -0.67
RAB4AP20338 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC10.9□□□□□ -0.67
RAB4AP20338 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 AL137783.1-201ENST00000623494 1896 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
RAB4AP20338 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 CLK3P2-201ENST00000427566 1453 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 AL357054.4-201ENST00000606285 2814 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB4AP20338 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 EYA3-202ENST00000373864 2459 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 TOMM22P5-201ENST00000416399 439 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB4AP20338 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
RAB4AP20338 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 AC018529.1-201ENST00000613063 361 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
RAB4AP20338 AC055717.3-201ENST00000622967 595 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms