Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CD28P10747 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 SAT1-201ENST00000379251 801 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 SAT1-202ENST00000379253 909 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 SAT1-203ENST00000379254 868 ntTSL 3 BASIC11.1□□□□□ -0.63
CD28P10747 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 GUSBP10-201ENST00000417412 665 ntBASIC11.1□□□□□ -0.63
CD28P10747 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC11.1□□□□□ -0.63
CD28P10747 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.1□□□□□ -0.63
CD28P10747 AC114501.1-201ENST00000445949 172 ntBASIC11.1□□□□□ -0.63
CD28P10747 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC11.1□□□□□ -0.63
CD28P10747 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC11.1□□□□□ -0.63
CD28P10747 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC11.1□□□□□ -0.63
CD28P10747 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC11.1□□□□□ -0.63
CD28P10747 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CD28P10747 RNA5SP417-201ENST00000516459 108 ntBASIC11.1□□□□□ -0.63
CD28P10747 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC11.1□□□□□ -0.63
CD28P10747 TMCO5B-205ENST00000530020 894 ntBASIC11.1□□□□□ -0.63
CD28P10747 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC11.1□□□□□ -0.63
CD28P10747 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC11.1□□□□□ -0.63
CD28P10747 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CD28P10747 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 REXO1L1P-201ENST00000379010 6598 ntBASIC11.1□□□□□ -0.63
CD28P10747 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CD28P10747 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.1□□□□□ -0.63
CD28P10747 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 CCT8L1P-201ENST00000465400 1674 ntBASIC11.1□□□□□ -0.63
CD28P10747 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CD28P10747 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CD28P10747 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CD28P10747 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 AC007191.1-201ENST00000623179 2995 ntBASIC11.09□□□□□ -0.63
CD28P10747 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 IL9RP3-201ENST00000442856 1674 ntBASIC11.09□□□□□ -0.63
CD28P10747 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 AC092638.2-201ENST00000441105 947 ntBASIC11.09□□□□□ -0.63
CD28P10747 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC11.09□□□□□ -0.63
CD28P10747 OR5BD1P-201ENST00000532527 817 ntBASIC11.09□□□□□ -0.63
CD28P10747 AP000911.2-201ENST00000534330 502 ntBASIC11.09□□□□□ -0.63
CD28P10747 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC11.09□□□□□ -0.63
CD28P10747 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CD28P10747 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.09□□□□□ -0.63
CD28P10747 SIGLEC22P-201ENST00000599104 714 ntBASIC11.09□□□□□ -0.63
CD28P10747 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC11.09□□□□□ -0.63
CD28P10747 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 AL021707.6-201ENST00000609212 491 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms