Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.82□□□□□ -0.2
CCNYL3P0C7X3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCNYL3P0C7X3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCNYL3P0C7X3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCNYL3P0C7X3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.82□□□□□ -0.2
CCNYL3P0C7X3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCNYL3P0C7X3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.82□□□□□ -0.2
CCNYL3P0C7X3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC103810.10-201ENST00000606504 343 ntBASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC021321.1-201ENST00000607397 1113 ntBASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 MIR6727-201ENST00000620702 65 ntBASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC099521.3-201ENST00000624251 2938 ntBASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 AC009093.10-201ENST00000641956 1442 ntBASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCNYL3P0C7X3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.8□□□□□ -0.2
CCNYL3P0C7X3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms