Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
IFNA1P01562 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.22□□□□□ -0.61
IFNA1P01562 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.22□□□□□ -0.61
IFNA1P01562 AC092028.1-202ENST00000641483 3547 ntBASIC11.22□□□□□ -0.61
IFNA1P01562 AC092028.1-201ENST00000641781 3540 ntBASIC11.22□□□□□ -0.61
IFNA1P01562 AL590440.2-201ENST00000641973 1595 ntBASIC11.22□□□□□ -0.61
IFNA1P01562 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IFNA1P01562 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
IFNA1P01562 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IFNA1P01562 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IFNA1P01562 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
IFNA1P01562 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
IFNA1P01562 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 DRD5P1-201ENST00000456605 1438 ntBASIC11.21□□□□□ -0.61
IFNA1P01562 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.21□□□□□ -0.61
IFNA1P01562 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
IFNA1P01562 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.21□□□□□ -0.61
IFNA1P01562 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.21□□□□□ -0.61
IFNA1P01562 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
IFNA1P01562 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.21□□□□□ -0.61
IFNA1P01562 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.21□□□□□ -0.61
IFNA1P01562 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
IFNA1P01562 AP001005.1-201ENST00000571755 1248 ntBASIC11.21□□□□□ -0.61
IFNA1P01562 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.21□□□□□ -0.61
IFNA1P01562 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
IFNA1P01562 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.21□□□□□ -0.61
IFNA1P01562 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 AL445228.2-201ENST00000605589 952 ntBASIC11.21□□□□□ -0.61
IFNA1P01562 AC002472.3-201ENST00000640124 621 ntBASIC11.21□□□□□ -0.61
IFNA1P01562 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
IFNA1P01562 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
IFNA1P01562 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.21□□□□□ -0.62
IFNA1P01562 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
IFNA1P01562 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.21□□□□□ -0.62
IFNA1P01562 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.21□□□□□ -0.62
IFNA1P01562 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
IFNA1P01562 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
IFNA1P01562 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
IFNA1P01562 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
IFNA1P01562 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
IFNA1P01562 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
IFNA1P01562 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
IFNA1P01562 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
IFNA1P01562 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
IFNA1P01562 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.21□□□□□ -0.62
IFNA1P01562 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.21□□□□□ -0.62
IFNA1P01562 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
IFNA1P01562 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.21□□□□□ -0.62
IFNA1P01562 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.21□□□□□ -0.62
IFNA1P01562 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
IFNA1P01562 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 AC104109.2-201ENST00000602919 1418 ntBASIC11.2□□□□□ -0.62
IFNA1P01562 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms