Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GPC4O75487 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC4O75487 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
GPC4O75487 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC4O75487 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GPC4O75487 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC4O75487 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
GPC4O75487 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC4O75487 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.27□□□□□ -0.12
GPC4O75487 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
GPC4O75487 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC4O75487 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC4O75487 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.27□□□□□ -0.12
GPC4O75487 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GPC4O75487 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC4O75487 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
GPC4O75487 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
GPC4O75487 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.27□□□□□ -0.13
GPC4O75487 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.27□□□□□ -0.13
GPC4O75487 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.27□□□□□ -0.13
GPC4O75487 BNIP3P13-201ENST00000599968 566 ntBASIC14.27□□□□□ -0.13
GPC4O75487 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC4O75487 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
GPC4O75487 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GPC4O75487 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC4O75487 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
GPC4O75487 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.27□□□□□ -0.13
GPC4O75487 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC4O75487 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC4O75487 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC4O75487 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GPC4O75487 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 CYP4F23P-201ENST00000593402 1579 ntBASIC14.26□□□□□ -0.13
GPC4O75487 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.26□□□□□ -0.13
GPC4O75487 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 AC018735.1-201ENST00000437208 1502 ntBASIC14.26□□□□□ -0.13
GPC4O75487 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 AC015909.5-201ENST00000624336 2266 ntBASIC14.26□□□□□ -0.13
GPC4O75487 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.26□□□□□ -0.13
GPC4O75487 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.26□□□□□ -0.13
GPC4O75487 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.26□□□□□ -0.13
GPC4O75487 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GPC4O75487 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.26□□□□□ -0.13
GPC4O75487 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 AC021723.1-201ENST00000486306 515 ntBASIC14.26□□□□□ -0.13
GPC4O75487 AC006122.1-201ENST00000493323 440 ntBASIC14.26□□□□□ -0.13
GPC4O75487 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.26□□□□□ -0.13
GPC4O75487 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.26□□□□□ -0.13
GPC4O75487 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.26□□□□□ -0.13
GPC4O75487 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.26□□□□□ -0.13
GPC4O75487 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
GPC4O75487 AC091271.1-201ENST00000611877 1162 ntBASIC14.26□□□□□ -0.13
GPC4O75487 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.26□□□□□ -0.13
GPC4O75487 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.26□□□□□ -0.13
GPC4O75487 DGCR9-201ENST00000609630 2415 ntBASIC14.26□□□□□ -0.13
GPC4O75487 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.26□□□□□ -0.13
GPC4O75487 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.26□□□□□ -0.13
GPC4O75487 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC4O75487 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms