Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TNFRSF11AQ9Y6Q6 UNC93B3-201ENST00000308076 687 ntBASIC27.74■■■□□ 2.03
TNFRSF11AQ9Y6Q6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TNFRSF11AQ9Y6Q6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
TNFRSF11AQ9Y6Q6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.73■■■□□ 2.03
TNFRSF11AQ9Y6Q6 MIR638-201ENST00000385237 100 ntBASIC27.73■■■□□ 2.03
TNFRSF11AQ9Y6Q6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.73■■■□□ 2.03
TNFRSF11AQ9Y6Q6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TNFRSF11AQ9Y6Q6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TNFRSF11AQ9Y6Q6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
TNFRSF11AQ9Y6Q6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TNFRSF11AQ9Y6Q6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TNFRSF11AQ9Y6Q6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TNFRSF11AQ9Y6Q6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TNFRSF11AQ9Y6Q6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.72■■■□□ 2.03
TNFRSF11AQ9Y6Q6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.72■■■□□ 2.03
TNFRSF11AQ9Y6Q6 AL139246.5-201ENST00000606645 996 ntBASIC27.72■■■□□ 2.03
TNFRSF11AQ9Y6Q6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TNFRSF11AQ9Y6Q6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
TNFRSF11AQ9Y6Q6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.71■■■□□ 2.03
TNFRSF11AQ9Y6Q6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
TNFRSF11AQ9Y6Q6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
TNFRSF11AQ9Y6Q6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.71■■■□□ 2.03
TNFRSF11AQ9Y6Q6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
TNFRSF11AQ9Y6Q6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.71■■■□□ 2.03
TNFRSF11AQ9Y6Q6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.03
TNFRSF11AQ9Y6Q6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.7■■■□□ 2.03
TNFRSF11AQ9Y6Q6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.7■■■□□ 2.03
TNFRSF11AQ9Y6Q6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
TNFRSF11AQ9Y6Q6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.7■■■□□ 2.02
TNFRSF11AQ9Y6Q6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.7■■■□□ 2.02
TNFRSF11AQ9Y6Q6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
TNFRSF11AQ9Y6Q6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
TNFRSF11AQ9Y6Q6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 AC079630.1-202ENST00000618127 1840 ntBASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 SERBP1P1-201ENST00000396021 1160 ntBASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TNFRSF11AQ9Y6Q6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TNFRSF11AQ9Y6Q6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TNFRSF11AQ9Y6Q6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.68■■■□□ 2.02
TNFRSF11AQ9Y6Q6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.68■■■□□ 2.02
TNFRSF11AQ9Y6Q6 AL031432.3-201ENST00000607698 485 ntBASIC27.68■■■□□ 2.02
TNFRSF11AQ9Y6Q6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
TNFRSF11AQ9Y6Q6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
TNFRSF11AQ9Y6Q6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
TNFRSF11AQ9Y6Q6 AC024257.2-201ENST00000549699 147 ntBASIC27.67■■■□□ 2.02
TNFRSF11AQ9Y6Q6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
TNFRSF11AQ9Y6Q6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.67■■■□□ 2.02
TNFRSF11AQ9Y6Q6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TNFRSF11AQ9Y6Q6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
TNFRSF11AQ9Y6Q6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
TNFRSF11AQ9Y6Q6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TNFRSF11AQ9Y6Q6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
TNFRSF11AQ9Y6Q6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.66■■■□□ 2.02
TNFRSF11AQ9Y6Q6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
TNFRSF11AQ9Y6Q6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
TNFRSF11AQ9Y6Q6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 AL136162.1-201ENST00000607711 1078 ntBASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TNFRSF11AQ9Y6Q6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.64■■■□□ 2.02
TNFRSF11AQ9Y6Q6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.02
TNFRSF11AQ9Y6Q6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
TNFRSF11AQ9Y6Q6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TNFRSF11AQ9Y6Q6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
TNFRSF11AQ9Y6Q6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TNFRSF11AQ9Y6Q6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TNFRSF11AQ9Y6Q6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
TNFRSF11AQ9Y6Q6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
TNFRSF11AQ9Y6Q6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.63■■■□□ 2.01
TNFRSF11AQ9Y6Q6 PBX2P1-201ENST00000493219 1291 ntBASIC27.63■■■□□ 2.01
TNFRSF11AQ9Y6Q6 AC106739.1-201ENST00000617035 715 ntBASIC27.63■■■□□ 2.01
TNFRSF11AQ9Y6Q6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.63■■■□□ 2.01
TNFRSF11AQ9Y6Q6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
TNFRSF11AQ9Y6Q6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
TNFRSF11AQ9Y6Q6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 MIR3181-201ENST00000578512 73 ntBASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.62■■■□□ 2.01
TNFRSF11AQ9Y6Q6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms