Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC15.52■□□□□ 0.08
SPCS1Q9Y6A9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS1Q9Y6A9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.52■□□□□ 0.07
SPCS1Q9Y6A9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SPCS1Q9Y6A9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS1Q9Y6A9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SPCS1Q9Y6A9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.51■□□□□ 0.07
SPCS1Q9Y6A9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 FBXW4P1-201ENST00000426721 2239 ntBASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
SPCS1Q9Y6A9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPCS1Q9Y6A9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPCS1Q9Y6A9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 AC026310.3-201ENST00000625186 2373 ntBASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 AC015813.7-201ENST00000623294 581 ntBASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.47■□□□□ 0.07
SPCS1Q9Y6A9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.46■□□□□ 0.07
SPCS1Q9Y6A9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPCS1Q9Y6A9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
SPCS1Q9Y6A9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SPCS1Q9Y6A9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS1Q9Y6A9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms