Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KRT125P-201ENST00000546827 989 ntBASIC21.77■■□□□ 1.08
PCDHGA11Q9Y5H2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA11Q9Y5H2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PCDHGA11Q9Y5H2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGA11Q9Y5H2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 MIR6722-201ENST00000617286 78 ntBASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA11Q9Y5H2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA11Q9Y5H2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA11Q9Y5H2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 AC092028.1-203ENST00000608262 953 ntBASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGA11Q9Y5H2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA11Q9Y5H2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 DUSP8P3-201ENST00000399571 1760 ntBASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGA11Q9Y5H2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 AC009299.2-201ENST00000482477 511 ntBASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 MIR4787-201ENST00000607364 84 ntBASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms