Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA9Q9Y5G4 BX842568.3-201ENST00000418104 571 ntBASIC21■□□□□ 0.95
PCDHGA9Q9Y5G4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA9Q9Y5G4 AC233992.3-201ENST00000607491 485 ntBASIC21■□□□□ 0.95
PCDHGA9Q9Y5G4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA9Q9Y5G4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA9Q9Y5G4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA9Q9Y5G4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA9Q9Y5G4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA9Q9Y5G4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA9Q9Y5G4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGA9Q9Y5G4 SLC6A10P-202ENST00000431994 2058 ntBASIC20.98■□□□□ 0.95
PCDHGA9Q9Y5G4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA9Q9Y5G4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA9Q9Y5G4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA9Q9Y5G4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGA9Q9Y5G4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA9Q9Y5G4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA9Q9Y5G4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA9Q9Y5G4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHGA9Q9Y5G4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGA9Q9Y5G4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA9Q9Y5G4 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHGA9Q9Y5G4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA9Q9Y5G4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGA9Q9Y5G4 AC009086.3-201ENST00000623486 1008 ntBASIC20.96■□□□□ 0.95
PCDHGA9Q9Y5G4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA9Q9Y5G4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGA9Q9Y5G4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA9Q9Y5G4 MIR3181-201ENST00000578512 73 ntBASIC20.95■□□□□ 0.94
PCDHGA9Q9Y5G4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA9Q9Y5G4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA9Q9Y5G4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA9Q9Y5G4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 AC006455.2-201ENST00000429931 906 ntBASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 AL161729.1-201ENST00000604104 1402 ntBASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA9Q9Y5G4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGA9Q9Y5G4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 AC133561.1-201ENST00000568600 2415 ntBASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA9Q9Y5G4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA9Q9Y5G4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGA9Q9Y5G4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
PCDHGA9Q9Y5G4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGA9Q9Y5G4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PCDHGA9Q9Y5G4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA9Q9Y5G4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA9Q9Y5G4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA9Q9Y5G4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA9Q9Y5G4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGA9Q9Y5G4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA9Q9Y5G4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA9Q9Y5G4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA9Q9Y5G4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms