Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 AC096631.2-201ENST00000436136 790 ntBASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB6Q9Y5F9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB6Q9Y5F9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB6Q9Y5F9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB6Q9Y5F9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB6Q9Y5F9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB6Q9Y5F9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB6Q9Y5F9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 AC005703.6-201ENST00000623265 1329 ntBASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB6Q9Y5F9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PCDHGB6Q9Y5F9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDHGB6Q9Y5F9 HLA-L-211ENST00000482052 1765 ntBASIC21.08■□□□□ 0.96
PCDHGB6Q9Y5F9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 AL161729.1-201ENST00000604104 1402 ntBASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB6Q9Y5F9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 AC005837.3-201ENST00000612163 286 ntBASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB6Q9Y5F9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB6Q9Y5F9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 SRD5A1P1-201ENST00000442297 786 ntBASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 AC106739.1-201ENST00000617035 715 ntBASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGB6Q9Y5F9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB6Q9Y5F9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB6Q9Y5F9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB6Q9Y5F9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGB6Q9Y5F9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms