Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4S1Q9Y587 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
AP4S1Q9Y587 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4S1Q9Y587 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4S1Q9Y587 CR559946.2-201ENST00000623684 991 ntBASIC21.24■□□□□ 0.99
AP4S1Q9Y587 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4S1Q9Y587 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
AP4S1Q9Y587 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
AP4S1Q9Y587 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4S1Q9Y587 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
AP4S1Q9Y587 AC060814.1-201ENST00000554326 538 ntBASIC21.23■□□□□ 0.99
AP4S1Q9Y587 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.23■□□□□ 0.99
AP4S1Q9Y587 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.23■□□□□ 0.99
AP4S1Q9Y587 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.23■□□□□ 0.99
AP4S1Q9Y587 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 C11orf96-202ENST00000528572 1834 ntBASIC21.22■□□□□ 0.99
AP4S1Q9Y587 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.22■□□□□ 0.99
AP4S1Q9Y587 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 AC092053.2-201ENST00000640557 1818 ntBASIC21.21■□□□□ 0.99
AP4S1Q9Y587 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 AC093536.1-201ENST00000569153 554 ntBASIC21.21■□□□□ 0.99
AP4S1Q9Y587 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4S1Q9Y587 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
AP4S1Q9Y587 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.2■□□□□ 0.99
AP4S1Q9Y587 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 AC090877.2-201ENST00000558441 1738 ntBASIC21.2■□□□□ 0.98
AP4S1Q9Y587 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
AP4S1Q9Y587 SLC25A24-204ENST00000569674 2357 ntBASIC21.19■□□□□ 0.98
AP4S1Q9Y587 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.19■□□□□ 0.98
AP4S1Q9Y587 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 AC139530.1-201ENST00000575312 1977 ntBASIC21.18■□□□□ 0.98
AP4S1Q9Y587 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
AP4S1Q9Y587 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4S1Q9Y587 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms