Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 AL499627.2-201ENST00000606283 725 ntBASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC35.11■■■■□ 3.21
CDK11AQ9UQ88 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CDK11AQ9UQ88 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC35.11■■■■□ 3.21
CDK11AQ9UQ88 AC090192.1-201ENST00000517740 490 ntBASIC35.11■■■■□ 3.21
CDK11AQ9UQ88 AL354811.1-201ENST00000610286 706 ntBASIC35.11■■■■□ 3.21
CDK11AQ9UQ88 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CDK11AQ9UQ88 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC35.11■■■■□ 3.21
CDK11AQ9UQ88 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC35.1■■■■□ 3.21
CDK11AQ9UQ88 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC35.1■■■■□ 3.21
CDK11AQ9UQ88 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC35.1■■■■□ 3.21
CDK11AQ9UQ88 AC012414.1-201ENST00000556676 535 ntBASIC35.1■■■■□ 3.21
CDK11AQ9UQ88 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
CDK11AQ9UQ88 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
CDK11AQ9UQ88 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
CDK11AQ9UQ88 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC35.09■■■■□ 3.21
CDK11AQ9UQ88 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC35.08■■■■□ 3.21
CDK11AQ9UQ88 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC35.08■■■■□ 3.21
CDK11AQ9UQ88 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC35.08■■■■□ 3.21
CDK11AQ9UQ88 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC35.08■■■■□ 3.21
CDK11AQ9UQ88 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
CDK11AQ9UQ88 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CDK11AQ9UQ88 AL137784.2-201ENST00000607332 1000 ntBASIC35.08■■■■□ 3.21
CDK11AQ9UQ88 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
CDK11AQ9UQ88 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
CDK11AQ9UQ88 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
CDK11AQ9UQ88 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC35.07■■■■□ 3.2
CDK11AQ9UQ88 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CDK11AQ9UQ88 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC35.07■■■■□ 3.2
CDK11AQ9UQ88 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
CDK11AQ9UQ88 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC35.07■■■■□ 3.2
CDK11AQ9UQ88 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CDK11AQ9UQ88 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC35.07■■■■□ 3.2
CDK11AQ9UQ88 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC35.07■■■■□ 3.2
CDK11AQ9UQ88 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CDK11AQ9UQ88 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC35.06■■■■□ 3.2
CDK11AQ9UQ88 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC35.06■■■■□ 3.2
CDK11AQ9UQ88 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC35.06■■■■□ 3.2
CDK11AQ9UQ88 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
CDK11AQ9UQ88 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
CDK11AQ9UQ88 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
CDK11AQ9UQ88 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CDK11AQ9UQ88 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC35.05■■■■□ 3.2
CDK11AQ9UQ88 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC35.05■■■■□ 3.2
CDK11AQ9UQ88 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 AC092437.1-201ENST00000624794 1048 ntBASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDK11AQ9UQ88 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 OR2I1P-207ENST00000453522 948 ntBASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 MIR6084-201ENST00000622012 110 ntBASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC35.03■■■■□ 3.2
CDK11AQ9UQ88 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CDK11AQ9UQ88 FP325331.1-202ENST00000623531 1380 ntBASIC35.02■■■■□ 3.2
CDK11AQ9UQ88 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
CDK11AQ9UQ88 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
CDK11AQ9UQ88 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC35.01■■■■□ 3.2
CDK11AQ9UQ88 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC35.01■■■■□ 3.19
CDK11AQ9UQ88 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC35■■■■□ 3.19
CDK11AQ9UQ88 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC35■■■■□ 3.19
CDK11AQ9UQ88 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC35■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms