Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN1Q9P244 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN1Q9P244 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN1Q9P244 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN1Q9P244 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN1Q9P244 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.65■□□□□ 0.9
LRFN1Q9P244 AC105265.2-201ENST00000467189 838 ntBASIC20.65■□□□□ 0.9
LRFN1Q9P244 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LRFN1Q9P244 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN1Q9P244 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.64■□□□□ 0.9
LRFN1Q9P244 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.64■□□□□ 0.9
LRFN1Q9P244 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRFN1Q9P244 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.64■□□□□ 0.9
LRFN1Q9P244 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRFN1Q9P244 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.64■□□□□ 0.89
LRFN1Q9P244 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.64■□□□□ 0.89
LRFN1Q9P244 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.64■□□□□ 0.89
LRFN1Q9P244 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.64■□□□□ 0.89
LRFN1Q9P244 pRNA.6-201ENST00000610482 90 ntBASIC20.64■□□□□ 0.89
LRFN1Q9P244 pRNA.5-201ENST00000612139 90 ntBASIC20.64■□□□□ 0.89
LRFN1Q9P244 pRNA.11-201ENST00000618423 90 ntBASIC20.64■□□□□ 0.89
LRFN1Q9P244 pRNA.13-201ENST00000619112 90 ntBASIC20.64■□□□□ 0.89
LRFN1Q9P244 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.64■□□□□ 0.89
LRFN1Q9P244 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRFN1Q9P244 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LRFN1Q9P244 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRFN1Q9P244 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
LRFN1Q9P244 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.64■□□□□ 0.89
LRFN1Q9P244 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LRFN1Q9P244 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LRFN1Q9P244 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.63■□□□□ 0.89
LRFN1Q9P244 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.63■□□□□ 0.89
LRFN1Q9P244 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 AC027682.1-201ENST00000562846 899 ntBASIC20.63■□□□□ 0.89
LRFN1Q9P244 AC008764.7-201ENST00000593779 1081 ntBASIC20.63■□□□□ 0.89
LRFN1Q9P244 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.63■□□□□ 0.89
LRFN1Q9P244 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN1Q9P244 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN1Q9P244 RASA4CP-201ENST00000424092 1398 ntBASIC20.62■□□□□ 0.89
LRFN1Q9P244 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN1Q9P244 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN1Q9P244 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN1Q9P244 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN1Q9P244 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN1Q9P244 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN1Q9P244 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN1Q9P244 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN1Q9P244 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN1Q9P244 LINC01124-201ENST00000409786 2117 ntBASIC20.61■□□□□ 0.89
LRFN1Q9P244 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.61■□□□□ 0.89
LRFN1Q9P244 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.61■□□□□ 0.89
LRFN1Q9P244 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.61■□□□□ 0.89
LRFN1Q9P244 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.61■□□□□ 0.89
LRFN1Q9P244 CA15P2-201ENST00000611168 834 ntBASIC20.61■□□□□ 0.89
LRFN1Q9P244 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.61■□□□□ 0.89
LRFN1Q9P244 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN1Q9P244 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN1Q9P244 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN1Q9P244 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LRFN1Q9P244 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN1Q9P244 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN1Q9P244 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.6■□□□□ 0.89
LRFN1Q9P244 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.6■□□□□ 0.89
LRFN1Q9P244 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN1Q9P244 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
LRFN1Q9P244 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRFN1Q9P244 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN1Q9P244 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN1Q9P244 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN1Q9P244 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.59■□□□□ 0.89
LRFN1Q9P244 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN1Q9P244 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN1Q9P244 AC099791.1-201ENST00000416440 715 ntBASIC20.59■□□□□ 0.89
LRFN1Q9P244 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.59■□□□□ 0.89
LRFN1Q9P244 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN1Q9P244 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN1Q9P244 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.59■□□□□ 0.89
LRFN1Q9P244 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRFN1Q9P244 LINC00543-201ENST00000567234 1845 ntBASIC20.59■□□□□ 0.89
LRFN1Q9P244 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRFN1Q9P244 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN1Q9P244 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN1Q9P244 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN1Q9P244 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.58■□□□□ 0.89
LRFN1Q9P244 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN1Q9P244 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN1Q9P244 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN1Q9P244 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN1Q9P244 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN1Q9P244 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN1Q9P244 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.58■□□□□ 0.89
LRFN1Q9P244 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms