Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HINT3Q9NQE9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HINT3Q9NQE9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.3■□□□□ 0.84
HINT3Q9NQE9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HINT3Q9NQE9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.3■□□□□ 0.84
HINT3Q9NQE9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HINT3Q9NQE9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HINT3Q9NQE9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HINT3Q9NQE9 LINC00526-201ENST00000581067 1875 ntBASIC20.3■□□□□ 0.84
HINT3Q9NQE9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HINT3Q9NQE9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HINT3Q9NQE9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 MIR4508-201ENST00000584178 70 ntBASIC20.29■□□□□ 0.84
HINT3Q9NQE9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HINT3Q9NQE9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HINT3Q9NQE9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HINT3Q9NQE9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HINT3Q9NQE9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HINT3Q9NQE9 AC103834.1-201ENST00000520383 144 ntBASIC20.28■□□□□ 0.84
HINT3Q9NQE9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HINT3Q9NQE9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HINT3Q9NQE9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HINT3Q9NQE9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HINT3Q9NQE9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HINT3Q9NQE9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HINT3Q9NQE9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 ECEL1P1-201ENST00000373592 1742 ntBASIC20.26■□□□□ 0.83
HINT3Q9NQE9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HINT3Q9NQE9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 AC022616.5-201ENST00000518796 181 ntBASIC20.25■□□□□ 0.83
HINT3Q9NQE9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HINT3Q9NQE9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.24■□□□□ 0.83
HINT3Q9NQE9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HINT3Q9NQE9 AC079630.1-202ENST00000618127 1840 ntBASIC20.23■□□□□ 0.83
HINT3Q9NQE9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HINT3Q9NQE9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HINT3Q9NQE9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.22■□□□□ 0.83
HINT3Q9NQE9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HINT3Q9NQE9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms