Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9N2K0 EP400NL-214ENST00000641289 2402 ntBASIC18.82■□□□□ 0.6
Q9N2K0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9N2K0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.82■□□□□ 0.6
Q9N2K0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9N2K0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9N2K0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Q9N2K0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9N2K0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9N2K0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.81■□□□□ 0.6
Q9N2K0 THA1P-201ENST00000590384 1145 ntBASIC18.81■□□□□ 0.6
Q9N2K0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.81■□□□□ 0.6
Q9N2K0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9N2K0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9N2K0 AC079630.1-202ENST00000618127 1840 ntBASIC18.81■□□□□ 0.6
Q9N2K0 GUSBP5-202ENST00000510805 1989 ntBASIC18.81■□□□□ 0.6
Q9N2K0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9N2K0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Q9N2K0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9N2K0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9N2K0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.8■□□□□ 0.6
Q9N2K0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9N2K0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q9N2K0 AC004987.1-201ENST00000428627 508 ntBASIC18.8■□□□□ 0.6
Q9N2K0 ATP5G2P3-201ENST00000429083 425 ntBASIC18.8■□□□□ 0.6
Q9N2K0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q9N2K0 AC004448.1-201ENST00000458332 883 ntBASIC18.8■□□□□ 0.6
Q9N2K0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.8■□□□□ 0.6
Q9N2K0 PVT1_1.1-201ENST00000615125 194 ntBASIC18.8■□□□□ 0.6
Q9N2K0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Q9N2K0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Q9N2K0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.8■□□□□ 0.6
Q9N2K0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Q9N2K0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q9N2K0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q9N2K0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9N2K0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9N2K0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9N2K0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.79■□□□□ 0.6
Q9N2K0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Q9N2K0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9N2K0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9N2K0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.79■□□□□ 0.6
Q9N2K0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9N2K0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.78■□□□□ 0.6
Q9N2K0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Q9N2K0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9N2K0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9N2K0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9N2K0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.78■□□□□ 0.6
Q9N2K0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Q9N2K0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9N2K0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Q9N2K0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9N2K0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.78■□□□□ 0.6
Q9N2K0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9N2K0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.77■□□□□ 0.6
Q9N2K0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.77■□□□□ 0.6
Q9N2K0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9N2K0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.77■□□□□ 0.6
Q9N2K0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Q9N2K0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9N2K0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.77■□□□□ 0.6
Q9N2K0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9N2K0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Q9N2K0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9N2K0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9N2K0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9N2K0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q9N2K0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9N2K0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9N2K0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9N2K0 LINC00526-201ENST00000581067 1875 ntBASIC18.76■□□□□ 0.59
Q9N2K0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.76■□□□□ 0.59
Q9N2K0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.76■□□□□ 0.59
Q9N2K0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.76■□□□□ 0.59
Q9N2K0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Q9N2K0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q9N2K0 ECEL1P1-201ENST00000373592 1742 ntBASIC18.76■□□□□ 0.59
Q9N2K0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.76■□□□□ 0.59
Q9N2K0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.75■□□□□ 0.59
Q9N2K0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 AC010980.1-201ENST00000587192 1142 ntBASIC18.75■□□□□ 0.59
Q9N2K0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Q9N2K0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q9N2K0 ESRRAP2-201ENST00000418437 1549 ntBASIC18.74■□□□□ 0.59
Q9N2K0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Q9N2K0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q9N2K0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q9N2K0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q9N2K0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.74■□□□□ 0.59
Q9N2K0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q9N2K0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms