Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEC61A2Q9H9S3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEC61A2Q9H9S3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SEC61A2Q9H9S3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.07■□□□□ 0.8
SEC61A2Q9H9S3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 SNX5-217ENST00000606557 1087 ntBASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A2Q9H9S3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 KRT16P3-201ENST00000439127 1283 ntBASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SEC61A2Q9H9S3 ANOS2P-203ENST00000472227 1816 ntBASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.04■□□□□ 0.8
SEC61A2Q9H9S3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 AC012676.1-201ENST00000574705 1949 ntBASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.03■□□□□ 0.8
SEC61A2Q9H9S3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 MTDHP2-201ENST00000601468 714 ntBASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC61A2Q9H9S3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEC61A2Q9H9S3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEC61A2Q9H9S3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC61A2Q9H9S3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms