Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ATXN3LQ9H3M9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
ATXN3LQ9H3M9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.64■■□□□ 1.38
ATXN3LQ9H3M9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
ATXN3LQ9H3M9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ATXN3LQ9H3M9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ATXN3LQ9H3M9 AC099791.1-201ENST00000416440 715 ntBASIC23.64■■□□□ 1.37
ATXN3LQ9H3M9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.64■■□□□ 1.37
ATXN3LQ9H3M9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.64■■□□□ 1.37
ATXN3LQ9H3M9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ATXN3LQ9H3M9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 LINC01124-201ENST00000409786 2117 ntBASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
ATXN3LQ9H3M9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ATXN3LQ9H3M9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 pRNA.6-201ENST00000610482 90 ntBASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 pRNA.5-201ENST00000612139 90 ntBASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 pRNA.11-201ENST00000618423 90 ntBASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 pRNA.13-201ENST00000619112 90 ntBASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ATXN3LQ9H3M9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
ATXN3LQ9H3M9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.6■■□□□ 1.37
ATXN3LQ9H3M9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ATXN3LQ9H3M9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.6■■□□□ 1.37
ATXN3LQ9H3M9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.6■■□□□ 1.37
ATXN3LQ9H3M9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ATXN3LQ9H3M9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.6■■□□□ 1.37
ATXN3LQ9H3M9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 MIR5787-201ENST00000611784 55 ntBASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 AC093323.1-202ENST00000635031 2045 ntBASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ATXN3LQ9H3M9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ATXN3LQ9H3M9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
ATXN3LQ9H3M9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
ATXN3LQ9H3M9 AC233992.3-201ENST00000607491 485 ntBASIC23.58■■□□□ 1.37
ATXN3LQ9H3M9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ATXN3LQ9H3M9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ATXN3LQ9H3M9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ATXN3LQ9H3M9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
ATXN3LQ9H3M9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
ATXN3LQ9H3M9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATXN3LQ9H3M9 IRS3P-201ENST00000223076 1006 ntBASIC23.56■■□□□ 1.36
ATXN3LQ9H3M9 BX842568.3-201ENST00000418104 571 ntBASIC23.56■■□□□ 1.36
ATXN3LQ9H3M9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.56■■□□□ 1.36
ATXN3LQ9H3M9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
ATXN3LQ9H3M9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATXN3LQ9H3M9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATXN3LQ9H3M9 AC141586.4-201ENST00000624558 1573 ntBASIC23.56■■□□□ 1.36
ATXN3LQ9H3M9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
ATXN3LQ9H3M9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
ATXN3LQ9H3M9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATXN3LQ9H3M9 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.54■■□□□ 1.36
ATXN3LQ9H3M9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms