Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 AC148477.6-201ENST00000623746 465 ntBASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 AC007375.3-201ENST00000600936 2314 ntBASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 AC092068.2-201ENST00000590491 1708 ntBASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LCE3DQ9BYE3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 AC126177.7-201ENST00000547904 679 ntBASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms