Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RTL8AQ9BWD3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.19■□□□□ 0.66
RTL8AQ9BWD3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL8AQ9BWD3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL8AQ9BWD3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 AC079630.1-202ENST00000618127 1840 ntBASIC19.16■□□□□ 0.66
RTL8AQ9BWD3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 UNC93B8-201ENST00000511903 705 ntBASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTL8AQ9BWD3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTL8AQ9BWD3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.14■□□□□ 0.66
RTL8AQ9BWD3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 KRT16P3-201ENST00000439127 1283 ntBASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RTL8AQ9BWD3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL8AQ9BWD3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL8AQ9BWD3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.13■□□□□ 0.65
RTL8AQ9BWD3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL8AQ9BWD3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
RTL8AQ9BWD3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTL8AQ9BWD3 MIR6724-1-201ENST00000616420 92 ntBASIC19.13■□□□□ 0.65
RTL8AQ9BWD3 MIR6724-2-201ENST00000616483 92 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms