Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.67■□□□□ 0.74
VRK1Q99986 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.67■□□□□ 0.74
VRK1Q99986 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VRK1Q99986 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VRK1Q99986 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VRK1Q99986 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VRK1Q99986 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VRK1Q99986 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
VRK1Q99986 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.65■□□□□ 0.74
VRK1Q99986 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK1Q99986 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.65■□□□□ 0.74
VRK1Q99986 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
VRK1Q99986 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VRK1Q99986 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.65■□□□□ 0.74
VRK1Q99986 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.65■□□□□ 0.74
VRK1Q99986 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK1Q99986 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK1Q99986 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VRK1Q99986 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK1Q99986 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.65■□□□□ 0.74
VRK1Q99986 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VRK1Q99986 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
VRK1Q99986 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.64■□□□□ 0.74
VRK1Q99986 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK1Q99986 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK1Q99986 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK1Q99986 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.64■□□□□ 0.73
VRK1Q99986 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.64■□□□□ 0.73
VRK1Q99986 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.64■□□□□ 0.73
VRK1Q99986 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.64■□□□□ 0.73
VRK1Q99986 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.64■□□□□ 0.73
VRK1Q99986 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.64■□□□□ 0.73
VRK1Q99986 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VRK1Q99986 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK1Q99986 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK1Q99986 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.64■□□□□ 0.73
VRK1Q99986 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VRK1Q99986 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.64■□□□□ 0.73
VRK1Q99986 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
VRK1Q99986 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK1Q99986 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
VRK1Q99986 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
VRK1Q99986 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VRK1Q99986 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.63■□□□□ 0.73
VRK1Q99986 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VRK1Q99986 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VRK1Q99986 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.63■□□□□ 0.73
VRK1Q99986 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VRK1Q99986 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
VRK1Q99986 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VRK1Q99986 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.63■□□□□ 0.73
VRK1Q99986 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.63■□□□□ 0.73
VRK1Q99986 AC004448.1-201ENST00000458332 883 ntBASIC19.63■□□□□ 0.73
VRK1Q99986 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.63■□□□□ 0.73
VRK1Q99986 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VRK1Q99986 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.63■□□□□ 0.73
VRK1Q99986 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.63■□□□□ 0.73
VRK1Q99986 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VRK1Q99986 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK1Q99986 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
VRK1Q99986 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VRK1Q99986 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VRK1Q99986 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK1Q99986 MIR4466-201ENST00000606121 54 ntBASIC19.62■□□□□ 0.73
VRK1Q99986 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.62■□□□□ 0.73
VRK1Q99986 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VRK1Q99986 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.62■□□□□ 0.73
VRK1Q99986 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK1Q99986 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK1Q99986 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK1Q99986 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VRK1Q99986 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VRK1Q99986 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.62■□□□□ 0.73
VRK1Q99986 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VRK1Q99986 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VRK1Q99986 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VRK1Q99986 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.62■□□□□ 0.73
VRK1Q99986 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.61■□□□□ 0.73
VRK1Q99986 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VRK1Q99986 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK1Q99986 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VRK1Q99986 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
VRK1Q99986 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VRK1Q99986 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VRK1Q99986 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VRK1Q99986 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms