Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A7Q99884 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC6A7Q99884 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SLC6A7Q99884 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A7Q99884 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A7Q99884 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC6A7Q99884 KRT125P-201ENST00000546827 989 ntBASIC19.49■□□□□ 0.71
SLC6A7Q99884 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.49■□□□□ 0.71
SLC6A7Q99884 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A7Q99884 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A7Q99884 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A7Q99884 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A7Q99884 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SLC6A7Q99884 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A7Q99884 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SLC6A7Q99884 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A7Q99884 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A7Q99884 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A7Q99884 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC6A7Q99884 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC6A7Q99884 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SLC6A7Q99884 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC6A7Q99884 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SLC6A7Q99884 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SLC6A7Q99884 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC6A7Q99884 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SLC6A7Q99884 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A7Q99884 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A7Q99884 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A7Q99884 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A7Q99884 KRT18P10-201ENST00000388836 1287 ntBASIC19.47■□□□□ 0.71
SLC6A7Q99884 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A7Q99884 BX664725.1-201ENST00000438252 379 ntBASIC19.47■□□□□ 0.71
SLC6A7Q99884 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A7Q99884 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLC6A7Q99884 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC6A7Q99884 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A7Q99884 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A7Q99884 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SLC6A7Q99884 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A7Q99884 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A7Q99884 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A7Q99884 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A7Q99884 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A7Q99884 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A7Q99884 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A7Q99884 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC6A7Q99884 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A7Q99884 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A7Q99884 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A7Q99884 AC022616.5-201ENST00000518796 181 ntBASIC19.45■□□□□ 0.7
SLC6A7Q99884 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A7Q99884 MIR4787-201ENST00000607364 84 ntBASIC19.45■□□□□ 0.7
SLC6A7Q99884 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC6A7Q99884 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A7Q99884 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SLC6A7Q99884 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A7Q99884 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A7Q99884 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A7Q99884 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A7Q99884 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A7Q99884 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SLC6A7Q99884 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC6A7Q99884 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A7Q99884 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A7Q99884 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC6A7Q99884 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A7Q99884 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A7Q99884 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A7Q99884 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A7Q99884 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A7Q99884 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A7Q99884 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.43■□□□□ 0.7
SLC6A7Q99884 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A7Q99884 AC008406.3-201ENST00000620001 1374 ntBASIC19.43■□□□□ 0.7
SLC6A7Q99884 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A7Q99884 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A7Q99884 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SLC6A7Q99884 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC6A7Q99884 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A7Q99884 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms