Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
BBS4Q96RK4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BBS4Q96RK4 AC005703.6-201ENST00000623265 1329 ntBASIC21.27■□□□□ 0.99
BBS4Q96RK4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BBS4Q96RK4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BBS4Q96RK4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.26■□□□□ 0.99
BBS4Q96RK4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
BBS4Q96RK4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BBS4Q96RK4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BBS4Q96RK4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
BBS4Q96RK4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BBS4Q96RK4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.26■□□□□ 0.99
BBS4Q96RK4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BBS4Q96RK4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BBS4Q96RK4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BBS4Q96RK4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BBS4Q96RK4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
BBS4Q96RK4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BBS4Q96RK4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.25■□□□□ 0.99
BBS4Q96RK4 MTDHP2-201ENST00000601468 714 ntBASIC21.25■□□□□ 0.99
BBS4Q96RK4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.25■□□□□ 0.99
BBS4Q96RK4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
BBS4Q96RK4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BBS4Q96RK4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BBS4Q96RK4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BBS4Q96RK4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
BBS4Q96RK4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
BBS4Q96RK4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BBS4Q96RK4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
BBS4Q96RK4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.24■□□□□ 0.99
BBS4Q96RK4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.24■□□□□ 0.99
BBS4Q96RK4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
BBS4Q96RK4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BBS4Q96RK4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
BBS4Q96RK4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.23■□□□□ 0.99
BBS4Q96RK4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BBS4Q96RK4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.23■□□□□ 0.99
BBS4Q96RK4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.22■□□□□ 0.99
BBS4Q96RK4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 TSPY9P-201ENST00000440215 945 ntBASIC21.22■□□□□ 0.99
BBS4Q96RK4 TSPY11P-201ENST00000442607 1045 ntBASIC21.22■□□□□ 0.99
BBS4Q96RK4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.22■□□□□ 0.99
BBS4Q96RK4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.22■□□□□ 0.99
BBS4Q96RK4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
BBS4Q96RK4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.22■□□□□ 0.99
BBS4Q96RK4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BBS4Q96RK4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.21■□□□□ 0.99
BBS4Q96RK4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
BBS4Q96RK4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
BBS4Q96RK4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.21■□□□□ 0.99
BBS4Q96RK4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.21■□□□□ 0.99
BBS4Q96RK4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.21■□□□□ 0.99
BBS4Q96RK4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.21■□□□□ 0.99
BBS4Q96RK4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BBS4Q96RK4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.2■□□□□ 0.99
BBS4Q96RK4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.2■□□□□ 0.98
BBS4Q96RK4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.2■□□□□ 0.98
BBS4Q96RK4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.2■□□□□ 0.98
BBS4Q96RK4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
BBS4Q96RK4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
BBS4Q96RK4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.2■□□□□ 0.98
BBS4Q96RK4 AC079630.1-202ENST00000618127 1840 ntBASIC21.2■□□□□ 0.98
BBS4Q96RK4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BBS4Q96RK4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BBS4Q96RK4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BBS4Q96RK4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BBS4Q96RK4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.19■□□□□ 0.98
BBS4Q96RK4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
BBS4Q96RK4 AC010997.5-201ENST00000609182 354 ntBASIC21.19■□□□□ 0.98
BBS4Q96RK4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BBS4Q96RK4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BBS4Q96RK4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BBS4Q96RK4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BBS4Q96RK4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
BBS4Q96RK4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
BBS4Q96RK4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms