Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GAFA1Q96PS6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GAFA1Q96PS6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.74■□□□□ 0.59
GAFA1Q96PS6 AL512631.2-201ENST00000604634 923 ntBASIC18.74■□□□□ 0.59
GAFA1Q96PS6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.74■□□□□ 0.59
GAFA1Q96PS6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GAFA1Q96PS6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GAFA1Q96PS6 AC092068.2-201ENST00000590491 1708 ntBASIC18.74■□□□□ 0.59
GAFA1Q96PS6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GAFA1Q96PS6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 C17orf82-201ENST00000623772 1530 ntBASIC18.73■□□□□ 0.59
GAFA1Q96PS6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
GAFA1Q96PS6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.72■□□□□ 0.59
GAFA1Q96PS6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 AC144652.1-201ENST00000609974 1624 ntBASIC18.71■□□□□ 0.59
GAFA1Q96PS6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 AC131281.2-201ENST00000520478 145 ntBASIC18.71■□□□□ 0.59
GAFA1Q96PS6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GAFA1Q96PS6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GAFA1Q96PS6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 MIR4466-201ENST00000606121 54 ntBASIC18.69■□□□□ 0.58
GAFA1Q96PS6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GAFA1Q96PS6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.68■□□□□ 0.58
GAFA1Q96PS6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 DUSP8P5-201ENST00000422884 1815 ntBASIC18.67■□□□□ 0.58
GAFA1Q96PS6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms