Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.24■□□□□ 0.67
SPG11Q96JI7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPG11Q96JI7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SPG11Q96JI7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPG11Q96JI7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SPG11Q96JI7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPG11Q96JI7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.24■□□□□ 0.67
SPG11Q96JI7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.24■□□□□ 0.67
SPG11Q96JI7 AC080038.1-201ENST00000611274 1154 ntBASIC19.24■□□□□ 0.67
SPG11Q96JI7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SPG11Q96JI7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPG11Q96JI7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPG11Q96JI7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPG11Q96JI7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.23■□□□□ 0.67
SPG11Q96JI7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPG11Q96JI7 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.22■□□□□ 0.67
SPG11Q96JI7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.22■□□□□ 0.67
SPG11Q96JI7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SPG11Q96JI7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPG11Q96JI7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.22■□□□□ 0.67
SPG11Q96JI7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SPG11Q96JI7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.22■□□□□ 0.67
SPG11Q96JI7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SPG11Q96JI7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.22■□□□□ 0.67
SPG11Q96JI7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPG11Q96JI7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SPG11Q96JI7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPG11Q96JI7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPG11Q96JI7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 AC104771.1-201ENST00000603335 964 ntBASIC19.21■□□□□ 0.67
SPG11Q96JI7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.21■□□□□ 0.67
SPG11Q96JI7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPG11Q96JI7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.21■□□□□ 0.67
SPG11Q96JI7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.21■□□□□ 0.67
SPG11Q96JI7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SPG11Q96JI7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPG11Q96JI7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPG11Q96JI7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPG11Q96JI7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.2■□□□□ 0.66
SPG11Q96JI7 AC137761.2-201ENST00000561729 223 ntBASIC19.2■□□□□ 0.66
SPG11Q96JI7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.2■□□□□ 0.66
SPG11Q96JI7 AC145350.3-201ENST00000569033 163 ntBASIC19.2■□□□□ 0.66
SPG11Q96JI7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPG11Q96JI7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPG11Q96JI7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPG11Q96JI7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPG11Q96JI7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPG11Q96JI7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPG11Q96JI7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 CROCCP5-201ENST00000436658 830 ntBASIC19.19■□□□□ 0.66
SPG11Q96JI7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPG11Q96JI7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 AC142086.2-201ENST00000569753 217 ntBASIC19.19■□□□□ 0.66
SPG11Q96JI7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.19■□□□□ 0.66
SPG11Q96JI7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPG11Q96JI7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPG11Q96JI7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.18■□□□□ 0.66
SPG11Q96JI7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.18■□□□□ 0.66
SPG11Q96JI7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SPG11Q96JI7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPG11Q96JI7 AC135731.1-201ENST00000569415 2548 ntBASIC19.18■□□□□ 0.66
SPG11Q96JI7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SPG11Q96JI7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPG11Q96JI7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPG11Q96JI7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.17■□□□□ 0.66
SPG11Q96JI7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPG11Q96JI7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPG11Q96JI7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPG11Q96JI7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPG11Q96JI7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPG11Q96JI7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.17■□□□□ 0.66
SPG11Q96JI7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SPG11Q96JI7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPG11Q96JI7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms