Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC46Q96FV0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 AC105265.2-201ENST00000467189 838 ntBASIC20.09■□□□□ 0.81
LRRC46Q96FV0 AC011298.3-201ENST00000615796 283 ntBASIC20.09■□□□□ 0.81
LRRC46Q96FV0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 AL161729.1-201ENST00000604104 1402 ntBASIC20.09■□□□□ 0.81
LRRC46Q96FV0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC46Q96FV0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 AC027682.1-201ENST00000562846 899 ntBASIC20.08■□□□□ 0.81
LRRC46Q96FV0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LRRC46Q96FV0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.08■□□□□ 0.8
LRRC46Q96FV0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC46Q96FV0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC46Q96FV0 AC068473.5-201ENST00000616428 2072 ntBASIC20.07■□□□□ 0.8
LRRC46Q96FV0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.07■□□□□ 0.8
LRRC46Q96FV0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 MIR939-201ENST00000401314 82 ntBASIC20.07■□□□□ 0.8
LRRC46Q96FV0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 AL136967.2-201ENST00000623968 743 ntBASIC20.07■□□□□ 0.8
LRRC46Q96FV0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC46Q96FV0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC46Q96FV0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC46Q96FV0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC46Q96FV0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC46Q96FV0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.06■□□□□ 0.8
LRRC46Q96FV0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC46Q96FV0 AC099791.2-201ENST00000605725 427 ntBASIC20.06■□□□□ 0.8
LRRC46Q96FV0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRRC46Q96FV0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
LRRC46Q96FV0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC46Q96FV0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 AP001330.3-201ENST00000520123 633 ntBASIC20.05■□□□□ 0.8
LRRC46Q96FV0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 MIR4767-201ENST00000582827 78 ntBASIC20.05■□□□□ 0.8
LRRC46Q96FV0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC46Q96FV0 RASA4CP-201ENST00000424092 1398 ntBASIC20.05■□□□□ 0.8
LRRC46Q96FV0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC46Q96FV0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.03■□□□□ 0.8
LRRC46Q96FV0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRC46Q96FV0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LRRC46Q96FV0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC46Q96FV0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LRRC46Q96FV0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC46Q96FV0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC46Q96FV0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms