Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM11Q96F44 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM11Q96F44 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM11Q96F44 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRIM11Q96F44 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM11Q96F44 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM11Q96F44 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM11Q96F44 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM11Q96F44 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM11Q96F44 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TRIM11Q96F44 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM11Q96F44 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM11Q96F44 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TRIM11Q96F44 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM11Q96F44 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM11Q96F44 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TRIM11Q96F44 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM11Q96F44 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM11Q96F44 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM11Q96F44 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM11Q96F44 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM11Q96F44 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM11Q96F44 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM11Q96F44 AC005703.6-201ENST00000623265 1329 ntBASIC23.77■■□□□ 1.4
TRIM11Q96F44 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM11Q96F44 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM11Q96F44 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM11Q96F44 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM11Q96F44 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM11Q96F44 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM11Q96F44 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM11Q96F44 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM11Q96F44 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TRIM11Q96F44 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM11Q96F44 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM11Q96F44 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM11Q96F44 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM11Q96F44 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM11Q96F44 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM11Q96F44 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM11Q96F44 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM11Q96F44 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TRIM11Q96F44 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.75■■□□□ 1.39
TRIM11Q96F44 Z92544.1-202ENST00000571933 1220 ntBASIC23.75■■□□□ 1.39
TRIM11Q96F44 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM11Q96F44 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TRIM11Q96F44 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 KRT125P-201ENST00000546827 989 ntBASIC23.74■■□□□ 1.39
TRIM11Q96F44 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM11Q96F44 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TRIM11Q96F44 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM11Q96F44 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM11Q96F44 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM11Q96F44 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM11Q96F44 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM11Q96F44 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM11Q96F44 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.73■■□□□ 1.39
TRIM11Q96F44 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.73■■□□□ 1.39
TRIM11Q96F44 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM11Q96F44 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.73■■□□□ 1.39
TRIM11Q96F44 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM11Q96F44 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM11Q96F44 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM11Q96F44 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM11Q96F44 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM11Q96F44 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
TRIM11Q96F44 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM11Q96F44 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TRIM11Q96F44 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.71■■□□□ 1.39
TRIM11Q96F44 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM11Q96F44 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM11Q96F44 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.7■■□□□ 1.39
TRIM11Q96F44 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM11Q96F44 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM11Q96F44 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TRIM11Q96F44 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM11Q96F44 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
TRIM11Q96F44 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
TRIM11Q96F44 AC092028.1-203ENST00000608262 953 ntBASIC23.7■■□□□ 1.38
TRIM11Q96F44 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
TRIM11Q96F44 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM11Q96F44 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM11Q96F44 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.7■■□□□ 1.38
TRIM11Q96F44 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM11Q96F44 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM11Q96F44 AC144652.1-201ENST00000609974 1624 ntBASIC23.7■■□□□ 1.38
TRIM11Q96F44 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM11Q96F44 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM11Q96F44 AL353803.4-201ENST00000565882 1934 ntBASIC23.69■■□□□ 1.38
TRIM11Q96F44 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM11Q96F44 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms