Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 AC133637.1-201ENST00000624115 1537 ntBASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.8■■□□□ 1.56
TRIM43Q96BQ3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM43Q96BQ3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 AC091060.1-201ENST00000623524 1766 ntBASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 AC104771.1-201ENST00000603335 964 ntBASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM43Q96BQ3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.77■■□□□ 1.56
TRIM43Q96BQ3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM43Q96BQ3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 AP005435.1-201ENST00000529293 1178 ntBASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TRIM43Q96BQ3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 AC137761.2-201ENST00000561729 223 ntBASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 AC145350.3-201ENST00000569033 163 ntBASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43Q96BQ3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 AC016769.1-201ENST00000409132 1010 ntBASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43Q96BQ3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 AC026185.1-201ENST00000445748 174 ntBASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms