Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCLNQ969V3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NCLNQ969V3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLNQ969V3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLNQ969V3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
NCLNQ969V3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NCLNQ969V3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.06
NCLNQ969V3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NCLNQ969V3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
NCLNQ969V3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.64■■□□□ 1.05
NCLNQ969V3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLNQ969V3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLNQ969V3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.64■■□□□ 1.05
NCLNQ969V3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLNQ969V3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.64■■□□□ 1.05
NCLNQ969V3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLNQ969V3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCLNQ969V3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLNQ969V3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLNQ969V3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLNQ969V3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLNQ969V3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLNQ969V3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.63■■□□□ 1.05
NCLNQ969V3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.63■■□□□ 1.05
NCLNQ969V3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.63■■□□□ 1.05
NCLNQ969V3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLNQ969V3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCLNQ969V3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCLNQ969V3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.63■■□□□ 1.05
NCLNQ969V3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NCLNQ969V3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.62■■□□□ 1.05
NCLNQ969V3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.62■■□□□ 1.05
NCLNQ969V3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NCLNQ969V3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.62■■□□□ 1.05
NCLNQ969V3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCLNQ969V3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
NCLNQ969V3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
NCLNQ969V3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.61■■□□□ 1.05
NCLNQ969V3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.61■■□□□ 1.05
NCLNQ969V3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.61■■□□□ 1.05
NCLNQ969V3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NCLNQ969V3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.61■■□□□ 1.05
NCLNQ969V3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.61■■□□□ 1.05
NCLNQ969V3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLNQ969V3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NCLNQ969V3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NCLNQ969V3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLNQ969V3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLNQ969V3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.6■■□□□ 1.05
NCLNQ969V3 AC092028.1-203ENST00000608262 953 ntBASIC21.6■■□□□ 1.05
NCLNQ969V3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLNQ969V3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLNQ969V3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLNQ969V3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLNQ969V3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLNQ969V3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLNQ969V3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NCLNQ969V3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLNQ969V3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.59■■□□□ 1.05
NCLNQ969V3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NCLNQ969V3 TSPY9P-201ENST00000440215 945 ntBASIC21.59■■□□□ 1.05
NCLNQ969V3 TSPY11P-201ENST00000442607 1045 ntBASIC21.59■■□□□ 1.05
NCLNQ969V3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.59■■□□□ 1.05
NCLNQ969V3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.59■■□□□ 1.05
NCLNQ969V3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLNQ969V3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLNQ969V3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLNQ969V3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.59■■□□□ 1.05
NCLNQ969V3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLNQ969V3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.58■■□□□ 1.05
NCLNQ969V3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.58■■□□□ 1.05
NCLNQ969V3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NCLNQ969V3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCLNQ969V3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
NCLNQ969V3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms