Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
AP3S1Q92572 AC092053.2-201ENST00000640557 1818 ntBASIC19.81■□□□□ 0.76
AP3S1Q92572 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP3S1Q92572 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S1Q92572 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S1Q92572 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S1Q92572 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S1Q92572 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
AP3S1Q92572 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.8■□□□□ 0.76
AP3S1Q92572 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.8■□□□□ 0.76
AP3S1Q92572 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S1Q92572 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S1Q92572 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S1Q92572 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.79■□□□□ 0.76
AP3S1Q92572 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 KRT18P10-201ENST00000388836 1287 ntBASIC19.79■□□□□ 0.76
AP3S1Q92572 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.79■□□□□ 0.76
AP3S1Q92572 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.79■□□□□ 0.76
AP3S1Q92572 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S1Q92572 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3S1Q92572 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
AP3S1Q92572 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.78■□□□□ 0.76
AP3S1Q92572 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3S1Q92572 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S1Q92572 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.78■□□□□ 0.76
AP3S1Q92572 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S1Q92572 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.77■□□□□ 0.76
AP3S1Q92572 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S1Q92572 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S1Q92572 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.77■□□□□ 0.76
AP3S1Q92572 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.77■□□□□ 0.76
AP3S1Q92572 AC025884.2-201ENST00000553429 711 ntBASIC19.77■□□□□ 0.76
AP3S1Q92572 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S1Q92572 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.75
AP3S1Q92572 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3S1Q92572 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3S1Q92572 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
AP3S1Q92572 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S1Q92572 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S1Q92572 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.76■□□□□ 0.75
AP3S1Q92572 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.76■□□□□ 0.75
AP3S1Q92572 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S1Q92572 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S1Q92572 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S1Q92572 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
AP3S1Q92572 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S1Q92572 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
AP3S1Q92572 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.75■□□□□ 0.75
AP3S1Q92572 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S1Q92572 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S1Q92572 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S1Q92572 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S1Q92572 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S1Q92572 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
AP3S1Q92572 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.75■□□□□ 0.75
AP3S1Q92572 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.75■□□□□ 0.75
AP3S1Q92572 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S1Q92572 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S1Q92572 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S1Q92572 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S1Q92572 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S1Q92572 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S1Q92572 AL162393.1-201ENST00000437852 946 ntBASIC19.74■□□□□ 0.75
AP3S1Q92572 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S1Q92572 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.74■□□□□ 0.75
AP3S1Q92572 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
AP3S1Q92572 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
AP3S1Q92572 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
AP3S1Q92572 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.73■□□□□ 0.75
AP3S1Q92572 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
AP3S1Q92572 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S1Q92572 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.72■□□□□ 0.75
AP3S1Q92572 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.72■□□□□ 0.75
AP3S1Q92572 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S1Q92572 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S1Q92572 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms