Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SHC3Q92529 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SHC3Q92529 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SHC3Q92529 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SHC3Q92529 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SHC3Q92529 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.1■■□□□ 1.45
SHC3Q92529 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.09■■□□□ 1.45
SHC3Q92529 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SHC3Q92529 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SHC3Q92529 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.09■■□□□ 1.45
SHC3Q92529 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.09■■□□□ 1.45
SHC3Q92529 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
SHC3Q92529 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.09■■□□□ 1.45
SHC3Q92529 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.09■■□□□ 1.45
SHC3Q92529 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SHC3Q92529 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SHC3Q92529 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.09■■□□□ 1.45
SHC3Q92529 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.08■■□□□ 1.45
SHC3Q92529 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SHC3Q92529 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.08■■□□□ 1.45
SHC3Q92529 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SHC3Q92529 AC010997.5-201ENST00000609182 354 ntBASIC24.08■■□□□ 1.45
SHC3Q92529 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.08■■□□□ 1.45
SHC3Q92529 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.08■■□□□ 1.45
SHC3Q92529 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SHC3Q92529 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.08■■□□□ 1.44
SHC3Q92529 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SHC3Q92529 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.08■■□□□ 1.44
SHC3Q92529 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHC3Q92529 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHC3Q92529 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHC3Q92529 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.07■■□□□ 1.44
SHC3Q92529 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHC3Q92529 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.07■■□□□ 1.44
SHC3Q92529 TSPY9P-201ENST00000440215 945 ntBASIC24.07■■□□□ 1.44
SHC3Q92529 TSPY11P-201ENST00000442607 1045 ntBASIC24.07■■□□□ 1.44
SHC3Q92529 UNC93B8-201ENST00000511903 705 ntBASIC24.07■■□□□ 1.44
SHC3Q92529 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHC3Q92529 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHC3Q92529 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHC3Q92529 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.06■■□□□ 1.44
SHC3Q92529 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.06■■□□□ 1.44
SHC3Q92529 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHC3Q92529 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
SHC3Q92529 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHC3Q92529 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHC3Q92529 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SHC3Q92529 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.05■■□□□ 1.44
SHC3Q92529 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
SHC3Q92529 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
SHC3Q92529 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.05■■□□□ 1.44
SHC3Q92529 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC3Q92529 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
SHC3Q92529 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC3Q92529 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.04■■□□□ 1.44
SHC3Q92529 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC3Q92529 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.04■■□□□ 1.44
SHC3Q92529 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.04■■□□□ 1.44
SHC3Q92529 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.04■■□□□ 1.44
SHC3Q92529 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC3Q92529 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.04■■□□□ 1.44
SHC3Q92529 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.04■■□□□ 1.44
SHC3Q92529 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC3Q92529 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC3Q92529 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SHC3Q92529 AC144652.1-201ENST00000609974 1624 ntBASIC24.03■■□□□ 1.44
SHC3Q92529 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC3Q92529 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.03■■□□□ 1.44
SHC3Q92529 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHC3Q92529 AL353803.4-201ENST00000565882 1934 ntBASIC24.03■■□□□ 1.44
SHC3Q92529 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC3Q92529 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHC3Q92529 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHC3Q92529 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHC3Q92529 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
SHC3Q92529 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHC3Q92529 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHC3Q92529 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SHC3Q92529 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC3Q92529 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC3Q92529 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC3Q92529 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.01■■□□□ 1.43
SHC3Q92529 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
SHC3Q92529 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SHC3Q92529 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.01■■□□□ 1.43
SHC3Q92529 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHC3Q92529 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHC3Q92529 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
SHC3Q92529 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.01■■□□□ 1.43
SHC3Q92529 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHC3Q92529 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
SHC3Q92529 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
SHC3Q92529 GUSBP5-201ENST00000418136 578 ntBASIC24■■□□□ 1.43
SHC3Q92529 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24■■□□□ 1.43
SHC3Q92529 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24■■□□□ 1.43
SHC3Q92529 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24■■□□□ 1.43
SHC3Q92529 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SHC3Q92529 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
SHC3Q92529 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.99■■□□□ 1.43
SHC3Q92529 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms