Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
CASKIN1Q8WXD9 GRAMD4P2-201ENST00000423297 1097 ntBASIC35.42■■■■□ 3.26
CASKIN1Q8WXD9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC35.42■■■■□ 3.26
CASKIN1Q8WXD9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
CASKIN1Q8WXD9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC35.42■■■■□ 3.26
CASKIN1Q8WXD9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC35.42■■■■□ 3.26
CASKIN1Q8WXD9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
CASKIN1Q8WXD9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
CASKIN1Q8WXD9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC35.41■■■■□ 3.26
CASKIN1Q8WXD9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CASKIN1Q8WXD9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CASKIN1Q8WXD9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CASKIN1Q8WXD9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CASKIN1Q8WXD9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
CASKIN1Q8WXD9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CASKIN1Q8WXD9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC35.4■■■■□ 3.26
CASKIN1Q8WXD9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CASKIN1Q8WXD9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC35.4■■■■□ 3.26
CASKIN1Q8WXD9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC35.4■■■■□ 3.26
CASKIN1Q8WXD9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC35.4■■■■□ 3.26
CASKIN1Q8WXD9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC35.39■■■■□ 3.26
CASKIN1Q8WXD9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 AL162430.1-201ENST00000480705 870 ntBASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 AC092666.2-201ENST00000613287 246 ntBASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 AC133637.1-201ENST00000624115 1537 ntBASIC35.38■■■■□ 3.25
CASKIN1Q8WXD9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CASKIN1Q8WXD9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CASKIN1Q8WXD9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC35.37■■■■□ 3.25
CASKIN1Q8WXD9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CASKIN1Q8WXD9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CASKIN1Q8WXD9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
CASKIN1Q8WXD9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC35.37■■■■□ 3.25
CASKIN1Q8WXD9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
CASKIN1Q8WXD9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC35.36■■■■□ 3.25
CASKIN1Q8WXD9 OR2I1P-207ENST00000453522 948 ntBASIC35.36■■■■□ 3.25
CASKIN1Q8WXD9 IGHV3-19-201ENST00000521488 291 ntBASIC35.36■■■■□ 3.25
CASKIN1Q8WXD9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC35.35■■■■□ 3.25
CASKIN1Q8WXD9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CASKIN1Q8WXD9 DUX4L4-201ENST00000566884 1269 ntBASIC35.35■■■■□ 3.25
CASKIN1Q8WXD9 SP2-202ENST00000613139 908 ntTSL 5 BASIC35.35■■■■□ 3.25
CASKIN1Q8WXD9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CASKIN1Q8WXD9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CASKIN1Q8WXD9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
CASKIN1Q8WXD9 TSPY26P-201ENST00000476365 1326 ntBASIC35.33■■■■□ 3.25
CASKIN1Q8WXD9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC35.33■■■■□ 3.25
CASKIN1Q8WXD9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC35.33■■■■□ 3.25
CASKIN1Q8WXD9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
CASKIN1Q8WXD9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC35.33■■■■□ 3.25
CASKIN1Q8WXD9 AC020928.2-201ENST00000588717 2197 ntBASIC35.33■■■■□ 3.25
CASKIN1Q8WXD9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC35.32■■■■□ 3.25
CASKIN1Q8WXD9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 AK1-201ENST00000223836 736 ntTSL 3 BASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 AC126544.1-201ENST00000580842 1059 ntBASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 AL031602.1-201ENST00000633169 911 ntBASIC35.32■■■■□ 3.24
CASKIN1Q8WXD9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 AC010525.1-201ENST00000585559 441 ntBASIC35.31■■■■□ 3.24
CASKIN1Q8WXD9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC35.31■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms