Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R1Q8TF05 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 C1orf229-201ENST00000623686 2258 ntBASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R1Q8TF05 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.42■■□□□ 1.18
PPP4R1Q8TF05 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R1Q8TF05 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R1Q8TF05 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PPP4R1Q8TF05 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.39■■□□□ 1.18
PPP4R1Q8TF05 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.39■■□□□ 1.18
PPP4R1Q8TF05 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PPP4R1Q8TF05 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.39■■□□□ 1.18
PPP4R1Q8TF05 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
PPP4R1Q8TF05 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R1Q8TF05 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R1Q8TF05 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
PPP4R1Q8TF05 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.39■■□□□ 1.17
PPP4R1Q8TF05 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PPP4R1Q8TF05 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 AC019171.1-201ENST00000601251 1056 ntBASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 LINC00565-201ENST00000562710 2331 ntBASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 AL022069.1-201ENST00000568025 1636 ntBASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP4R1Q8TF05 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP4R1Q8TF05 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PPP4R1Q8TF05 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms