Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SHKBP1Q8TBC3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.67■■□□□ 1.38
SHKBP1Q8TBC3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.67■■□□□ 1.38
SHKBP1Q8TBC3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.67■■□□□ 1.38
SHKBP1Q8TBC3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.67■■□□□ 1.38
SHKBP1Q8TBC3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHKBP1Q8TBC3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 MIR5787-201ENST00000611784 55 ntBASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SHKBP1Q8TBC3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 AC022211.4-201ENST00000625094 2161 ntBASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 AC092666.2-201ENST00000613287 246 ntBASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHKBP1Q8TBC3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SHKBP1Q8TBC3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SHKBP1Q8TBC3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SHKBP1Q8TBC3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
SHKBP1Q8TBC3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.64■■□□□ 1.37
SHKBP1Q8TBC3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SHKBP1Q8TBC3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHKBP1Q8TBC3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.64■■□□□ 1.37
SHKBP1Q8TBC3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SHKBP1Q8TBC3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SHKBP1Q8TBC3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SHKBP1Q8TBC3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.62■■□□□ 1.37
SHKBP1Q8TBC3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHKBP1Q8TBC3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.62■■□□□ 1.37
SHKBP1Q8TBC3 MIR6821-201ENST00000617625 74 ntBASIC23.62■■□□□ 1.37
SHKBP1Q8TBC3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
SHKBP1Q8TBC3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHKBP1Q8TBC3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SHKBP1Q8TBC3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHKBP1Q8TBC3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.61■■□□□ 1.37
SHKBP1Q8TBC3 AC233992.3-201ENST00000607491 485 ntBASIC23.61■■□□□ 1.37
SHKBP1Q8TBC3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.61■■□□□ 1.37
SHKBP1Q8TBC3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 BX842568.3-201ENST00000418104 571 ntBASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 pRNA.6-201ENST00000610482 90 ntBASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 pRNA.5-201ENST00000612139 90 ntBASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 pRNA.11-201ENST00000618423 90 ntBASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 pRNA.13-201ENST00000619112 90 ntBASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHKBP1Q8TBC3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 IRS3P-201ENST00000223076 1006 ntBASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 AC097381.1-201ENST00000429019 1296 ntBASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SHKBP1Q8TBC3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SHKBP1Q8TBC3 AP003733.4-201ENST00000623785 1697 ntBASIC23.58■■□□□ 1.37
SHKBP1Q8TBC3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SHKBP1Q8TBC3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SHKBP1Q8TBC3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.58■■□□□ 1.37
SHKBP1Q8TBC3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SHKBP1Q8TBC3 AC087623.3-201ENST00000607047 1098 ntBASIC23.58■■□□□ 1.37
SHKBP1Q8TBC3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.58■■□□□ 1.37
SHKBP1Q8TBC3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.58■■□□□ 1.36
SHKBP1Q8TBC3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SHKBP1Q8TBC3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 426.5 ms