Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 MIR6722-201ENST00000617286 78 ntBASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMARCC2Q8TAQ2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SMARCC2Q8TAQ2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SMARCC2Q8TAQ2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMARCC2Q8TAQ2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SMARCC2Q8TAQ2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SMARCC2Q8TAQ2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SMARCC2Q8TAQ2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SMARCC2Q8TAQ2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMARCC2Q8TAQ2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.37■■□□□ 1.81
SMARCC2Q8TAQ2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.37■■□□□ 1.81
SMARCC2Q8TAQ2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMARCC2Q8TAQ2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMARCC2Q8TAQ2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMARCC2Q8TAQ2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
SMARCC2Q8TAQ2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.37■■□□□ 1.81
SMARCC2Q8TAQ2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 AL117332.1-201ENST00000622628 974 ntBASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.36■■□□□ 1.81
SMARCC2Q8TAQ2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC2Q8TAQ2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC2Q8TAQ2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC2Q8TAQ2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC2Q8TAQ2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC2Q8TAQ2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC2Q8TAQ2 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.33■■□□□ 1.81
SMARCC2Q8TAQ2 AL356740.2-201ENST00000601559 647 ntBASIC26.33■■□□□ 1.81
SMARCC2Q8TAQ2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC2Q8TAQ2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.32■■□□□ 1.8
SMARCC2Q8TAQ2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC2Q8TAQ2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC2Q8TAQ2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms