Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 AC005703.6-201ENST00000623265 1329 ntBASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH19Q8TAB3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PCDH19Q8TAB3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH19Q8TAB3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH19Q8TAB3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH19Q8TAB3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH19Q8TAB3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDH19Q8TAB3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH19Q8TAB3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
PCDH19Q8TAB3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH19Q8TAB3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH19Q8TAB3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 TSPY9P-201ENST00000440215 945 ntBASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 TSPY11P-201ENST00000442607 1045 ntBASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 MTDHP2-201ENST00000601468 714 ntBASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH19Q8TAB3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDH19Q8TAB3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 UNC93B8-201ENST00000511903 705 ntBASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 AC010997.5-201ENST00000609182 354 ntBASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH19Q8TAB3 AC012676.1-201ENST00000574705 1949 ntBASIC23.21■■□□□ 1.31
PCDH19Q8TAB3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH19Q8TAB3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
PCDH19Q8TAB3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH19Q8TAB3 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDH19Q8TAB3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH19Q8TAB3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDH19Q8TAB3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH19Q8TAB3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms