Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.58■■□□□ 1.37
SMRP1Q8NCR6 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.58■■□□□ 1.37
SMRP1Q8NCR6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.58■■□□□ 1.36
SMRP1Q8NCR6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 CDCA4P2-201ENST00000441182 718 ntBASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.57■■□□□ 1.36
SMRP1Q8NCR6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 ABHD17AP1-201ENST00000358206 933 ntBASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.56■■□□□ 1.36
SMRP1Q8NCR6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 AC073111.5-205ENST00000641717 521 ntBASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMRP1Q8NCR6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMRP1Q8NCR6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SMRP1Q8NCR6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SMRP1Q8NCR6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SMRP1Q8NCR6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.54■■□□□ 1.36
SMRP1Q8NCR6 KRT18P61-201ENST00000585825 1298 ntBASIC23.54■■□□□ 1.36
SMRP1Q8NCR6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.54■■□□□ 1.36
SMRP1Q8NCR6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.54■■□□□ 1.36
SMRP1Q8NCR6 AC092803.2-201ENST00000564287 1899 ntBASIC23.53■■□□□ 1.36
SMRP1Q8NCR6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.53■■□□□ 1.36
SMRP1Q8NCR6 OR2I1P-207ENST00000453522 948 ntBASIC23.53■■□□□ 1.36
SMRP1Q8NCR6 AC010525.1-201ENST00000585559 441 ntBASIC23.53■■□□□ 1.36
SMRP1Q8NCR6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SMRP1Q8NCR6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMRP1Q8NCR6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMRP1Q8NCR6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 AC091060.1-201ENST00000623524 1766 ntBASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.52■■□□□ 1.36
SMRP1Q8NCR6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 AC016769.1-201ENST00000409132 1010 ntBASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 AC104771.1-201ENST00000603335 964 ntBASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 AL499627.2-201ENST00000606283 725 ntBASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.51■■□□□ 1.35
SMRP1Q8NCR6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 AC137761.2-201ENST00000561729 223 ntBASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 AC145350.3-201ENST00000569033 163 ntBASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 ALDH1A3-203ENST00000557963 1670 ntBASIC23.5■■□□□ 1.35
SMRP1Q8NCR6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.49■■□□□ 1.35
SMRP1Q8NCR6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMRP1Q8NCR6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms