Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM116Q8NCL8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM116Q8NCL8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM116Q8NCL8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM116Q8NCL8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM116Q8NCL8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM116Q8NCL8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM116Q8NCL8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM116Q8NCL8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 KRT18P24-201ENST00000344739 1156 ntBASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 AC120024.1-201ENST00000562672 995 ntBASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEM116Q8NCL8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 AL117328.2-201ENST00000624617 1940 ntBASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM116Q8NCL8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM116Q8NCL8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM116Q8NCL8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 YBX1P4-201ENST00000392794 808 ntBASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM116Q8NCL8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 MIR4508-201ENST00000584178 70 ntBASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 THA1P-201ENST00000590384 1145 ntBASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM116Q8NCL8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 AC233723.2-201ENST00000623798 2106 ntBASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 KRT8P33-201ENST00000508125 1423 ntBASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 AF131216.4-201ENST00000638924 1588 ntBASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TMEM116Q8NCL8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms