Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ATP11CQ8NB49 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP11CQ8NB49 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP11CQ8NB49 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP11CQ8NB49 MIR3621-201ENST00000580529 85 ntBASIC23.38■■□□□ 1.33
ATP11CQ8NB49 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.38■■□□□ 1.33
ATP11CQ8NB49 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP11CQ8NB49 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.38■■□□□ 1.33
ATP11CQ8NB49 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP11CQ8NB49 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 AC079834.2-201ENST00000609776 1949 ntBASIC23.37■■□□□ 1.33
ATP11CQ8NB49 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP11CQ8NB49 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
ATP11CQ8NB49 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATP11CQ8NB49 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP11CQ8NB49 AC005703.6-201ENST00000623265 1329 ntBASIC23.33■■□□□ 1.33
ATP11CQ8NB49 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP11CQ8NB49 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
ATP11CQ8NB49 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ATP11CQ8NB49 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.33■■□□□ 1.33
ATP11CQ8NB49 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.33■■□□□ 1.33
ATP11CQ8NB49 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ATP11CQ8NB49 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ATP11CQ8NB49 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATP11CQ8NB49 AL161729.1-201ENST00000604104 1402 ntBASIC23.32■■□□□ 1.32
ATP11CQ8NB49 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 AC131281.2-201ENST00000520478 145 ntBASIC23.31■■□□□ 1.32
ATP11CQ8NB49 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.31■■□□□ 1.32
ATP11CQ8NB49 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
ATP11CQ8NB49 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.3■■□□□ 1.32
ATP11CQ8NB49 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP11CQ8NB49 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP11CQ8NB49 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP11CQ8NB49 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms