Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN22Q8N7P3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN22Q8N7P3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 AC074183.2-201ENST00000623112 922 ntBASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN22Q8N7P3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 KRT8P33-201ENST00000508125 1423 ntBASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN22Q8N7P3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 ECEL1P1-201ENST00000373592 1742 ntBASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 AC127496.7-201ENST00000625110 1798 ntBASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 AC137767.1-201ENST00000602918 1920 ntBASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 GUSBP5-202ENST00000510805 1989 ntBASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CLDN22Q8N7P3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 LINC00526-201ENST00000581067 1875 ntBASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN22Q8N7P3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 AC103834.1-201ENST00000520383 144 ntBASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 ESRRAP2-201ENST00000418437 1549 ntBASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN22Q8N7P3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN22Q8N7P3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN22Q8N7P3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms