Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC00471Q8N535 LINC00565-201ENST00000562710 2331 ntBASIC20.55■□□□□ 0.88
LINC00471Q8N535 AC137767.1-201ENST00000602918 1920 ntBASIC20.55■□□□□ 0.88
LINC00471Q8N535 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00471Q8N535 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00471Q8N535 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00471Q8N535 RARRES2P2-201ENST00000394842 485 ntBASIC20.55■□□□□ 0.88
LINC00471Q8N535 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.55■□□□□ 0.88
LINC00471Q8N535 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00471Q8N535 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC00471Q8N535 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC00471Q8N535 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LINC00471Q8N535 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LINC00471Q8N535 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC00471Q8N535 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC00471Q8N535 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00471Q8N535 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00471Q8N535 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.54■□□□□ 0.88
LINC00471Q8N535 U85056.1-201ENST00000616429 682 ntBASIC20.54■□□□□ 0.88
LINC00471Q8N535 AC079630.1-202ENST00000618127 1840 ntBASIC20.54■□□□□ 0.88
LINC00471Q8N535 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00471Q8N535 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00471Q8N535 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00471Q8N535 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LINC00471Q8N535 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00471Q8N535 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00471Q8N535 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LINC00471Q8N535 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LINC00471Q8N535 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 AC139795.1-202ENST00000500444 432 ntBASIC20.53■□□□□ 0.88
LINC00471Q8N535 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00471Q8N535 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.52■□□□□ 0.88
LINC00471Q8N535 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00471Q8N535 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00471Q8N535 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC00471Q8N535 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC00471Q8N535 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00471Q8N535 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LINC00471Q8N535 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00471Q8N535 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00471Q8N535 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00471Q8N535 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
LINC00471Q8N535 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00471Q8N535 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00471Q8N535 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00471Q8N535 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00471Q8N535 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LINC00471Q8N535 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00471Q8N535 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00471Q8N535 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00471Q8N535 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00471Q8N535 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
LINC00471Q8N535 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC00471Q8N535 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
LINC00471Q8N535 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
LINC00471Q8N535 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00471Q8N535 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00471Q8N535 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00471Q8N535 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.5■□□□□ 0.87
LINC00471Q8N535 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00471Q8N535 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00471Q8N535 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.49■□□□□ 0.87
LINC00471Q8N535 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00471Q8N535 KRT18P60-201ENST00000312876 1297 ntBASIC20.49■□□□□ 0.87
LINC00471Q8N535 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.49■□□□□ 0.87
LINC00471Q8N535 AC004448.1-201ENST00000458332 883 ntBASIC20.49■□□□□ 0.87
LINC00471Q8N535 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LINC00471Q8N535 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00471Q8N535 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00471Q8N535 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00471Q8N535 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00471Q8N535 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.48■□□□□ 0.87
LINC00471Q8N535 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00471Q8N535 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00471Q8N535 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00471Q8N535 KRT18P24-201ENST00000344739 1156 ntBASIC20.48■□□□□ 0.87
LINC00471Q8N535 AC120024.1-201ENST00000562672 995 ntBASIC20.48■□□□□ 0.87
LINC00471Q8N535 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LINC00471Q8N535 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.48■□□□□ 0.87
LINC00471Q8N535 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LINC00471Q8N535 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LINC00471Q8N535 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LINC00471Q8N535 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00471Q8N535 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00471Q8N535 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00471Q8N535 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.47■□□□□ 0.87
LINC00471Q8N535 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00471Q8N535 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00471Q8N535 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00471Q8N535 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00471Q8N535 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
LINC00471Q8N535 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.47■□□□□ 0.87
LINC00471Q8N535 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms