Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 AL137784.2-201ENST00000607332 1000 ntBASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 MIR6084-201ENST00000622012 110 ntBASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 AC141586.4-201ENST00000624558 1573 ntBASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.54■■□□□ 1.04
COL27A1Q8IZC6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 TERF1P2-201ENST00000583350 1212 ntBASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.53■■□□□ 1.04
COL27A1Q8IZC6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL27A1Q8IZC6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.52■■□□□ 1.04
COL27A1Q8IZC6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL27A1Q8IZC6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
COL27A1Q8IZC6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COL27A1Q8IZC6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.52■■□□□ 1.03
COL27A1Q8IZC6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.52■■□□□ 1.03
COL27A1Q8IZC6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.52■■□□□ 1.03
COL27A1Q8IZC6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.52■■□□□ 1.03
COL27A1Q8IZC6 AL499627.2-201ENST00000606283 725 ntBASIC21.52■■□□□ 1.03
COL27A1Q8IZC6 AL354811.1-201ENST00000610286 706 ntBASIC21.52■■□□□ 1.03
COL27A1Q8IZC6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 OR2I1P-207ENST00000453522 948 ntBASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 AC133637.1-201ENST00000624115 1537 ntBASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL27A1Q8IZC6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COL27A1Q8IZC6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COL27A1Q8IZC6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL27A1Q8IZC6 KRT18P61-201ENST00000585825 1298 ntBASIC21.5■■□□□ 1.03
COL27A1Q8IZC6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.5■■□□□ 1.03
COL27A1Q8IZC6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.5■■□□□ 1.03
COL27A1Q8IZC6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL27A1Q8IZC6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL27A1Q8IZC6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
COL27A1Q8IZC6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL27A1Q8IZC6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms