Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 AC139530.1-201ENST00000575312 1977 ntBASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD2Q8IV50 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LYSMD2Q8IV50 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD2Q8IV50 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD2Q8IV50 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 DUX4L11-201ENST00000611504 1267 ntBASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 DUX4L12-201ENST00000614593 1267 ntBASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 DUX4L14-201ENST00000621227 1267 ntBASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.74■□□□□ 0.75
LYSMD2Q8IV50 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.73■□□□□ 0.75
LYSMD2Q8IV50 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD2Q8IV50 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD2Q8IV50 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms