Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 AC137630.3-201ENST00000607245 391 ntBASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
ZC3HC1Q86WB0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.39■■□□□ 1.18
ZC3HC1Q86WB0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.39■■□□□ 1.17
ZC3HC1Q86WB0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.38■■□□□ 1.17
ZC3HC1Q86WB0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.38■■□□□ 1.17
ZC3HC1Q86WB0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.38■■□□□ 1.17
ZC3HC1Q86WB0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZC3HC1Q86WB0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZC3HC1Q86WB0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZC3HC1Q86WB0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
ZC3HC1Q86WB0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
ZC3HC1Q86WB0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.36■■□□□ 1.17
ZC3HC1Q86WB0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
ZC3HC1Q86WB0 AL031848.2-201ENST00000607670 837 ntBASIC22.36■■□□□ 1.17
ZC3HC1Q86WB0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
ZC3HC1Q86WB0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
ZC3HC1Q86WB0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZC3HC1Q86WB0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3HC1Q86WB0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.35■■□□□ 1.17
ZC3HC1Q86WB0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3HC1Q86WB0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3HC1Q86WB0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3HC1Q86WB0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3HC1Q86WB0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3HC1Q86WB0 AL353803.4-201ENST00000565882 1934 ntBASIC22.33■■□□□ 1.17
ZC3HC1Q86WB0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZC3HC1Q86WB0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZC3HC1Q86WB0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.33■■□□□ 1.17
ZC3HC1Q86WB0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.33■■□□□ 1.17
ZC3HC1Q86WB0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
ZC3HC1Q86WB0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.16
ZC3HC1Q86WB0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.33■■□□□ 1.16
ZC3HC1Q86WB0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ZC3HC1Q86WB0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ZC3HC1Q86WB0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3HC1Q86WB0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
ZC3HC1Q86WB0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.3■■□□□ 1.16
ZC3HC1Q86WB0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.3■■□□□ 1.16
ZC3HC1Q86WB0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.3■■□□□ 1.16
ZC3HC1Q86WB0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms