Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
RNF180Q86T96 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RNF180Q86T96 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RNF180Q86T96 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
RNF180Q86T96 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.2■■□□□ 1.63
RNF180Q86T96 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
RNF180Q86T96 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF180Q86T96 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.2■■□□□ 1.62
RNF180Q86T96 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RNF180Q86T96 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF180Q86T96 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF180Q86T96 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
RNF180Q86T96 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF180Q86T96 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.19■■□□□ 1.62
RNF180Q86T96 HLA-L-211ENST00000482052 1765 ntBASIC25.19■■□□□ 1.62
RNF180Q86T96 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF180Q86T96 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
RNF180Q86T96 KRT18P14-201ENST00000534205 1250 ntBASIC25.19■■□□□ 1.62
RNF180Q86T96 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF180Q86T96 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.19■■□□□ 1.62
RNF180Q86T96 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF180Q86T96 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF180Q86T96 LINC02228-203ENST00000641970 1355 ntBASIC25.18■■□□□ 1.62
RNF180Q86T96 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.18■■□□□ 1.62
RNF180Q86T96 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.18■■□□□ 1.62
RNF180Q86T96 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.18■■□□□ 1.62
RNF180Q86T96 AL121749.1-202ENST00000609313 2153 ntBASIC25.18■■□□□ 1.62
RNF180Q86T96 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RNF180Q86T96 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
RNF180Q86T96 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RNF180Q86T96 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.17■■□□□ 1.62
RNF180Q86T96 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RNF180Q86T96 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF180Q86T96 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF180Q86T96 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF180Q86T96 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.16■■□□□ 1.62
RNF180Q86T96 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RNF180Q86T96 TERF1P2-201ENST00000583350 1212 ntBASIC25.16■■□□□ 1.62
RNF180Q86T96 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF180Q86T96 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
RNF180Q86T96 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF180Q86T96 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.15■■□□□ 1.62
RNF180Q86T96 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF180Q86T96 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RNF180Q86T96 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF180Q86T96 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
RNF180Q86T96 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF180Q86T96 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.15■■□□□ 1.62
RNF180Q86T96 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.15■■□□□ 1.62
RNF180Q86T96 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF180Q86T96 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF180Q86T96 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF180Q86T96 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF180Q86T96 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF180Q86T96 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF180Q86T96 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.14■■□□□ 1.62
RNF180Q86T96 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.14■■□□□ 1.62
RNF180Q86T96 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.14■■□□□ 1.62
RNF180Q86T96 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.14■■□□□ 1.62
RNF180Q86T96 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF180Q86T96 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.14■■□□□ 1.61
RNF180Q86T96 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RNF180Q86T96 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.13■■□□□ 1.61
RNF180Q86T96 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RNF180Q86T96 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF180Q86T96 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
RNF180Q86T96 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF180Q86T96 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
RNF180Q86T96 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RNF180Q86T96 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 AL499627.2-201ENST00000606283 725 ntBASIC25.13■■□□□ 1.61
RNF180Q86T96 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF180Q86T96 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF180Q86T96 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RNF180Q86T96 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF180Q86T96 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
RNF180Q86T96 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF180Q86T96 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.12■■□□□ 1.61
RNF180Q86T96 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.12■■□□□ 1.61
RNF180Q86T96 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF180Q86T96 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RNF180Q86T96 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF180Q86T96 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
RNF180Q86T96 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF180Q86T96 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF180Q86T96 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF180Q86T96 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF180Q86T96 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
RNF180Q86T96 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.11■■□□□ 1.61
RNF180Q86T96 OR2I1P-207ENST00000453522 948 ntBASIC25.11■■□□□ 1.61
RNF180Q86T96 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.11■■□□□ 1.61
RNF180Q86T96 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms