Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC021242.3-201ENST00000607598 1377 ntBASIC20.43■□□□□ 0.86
NIPAL3Q6P499 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NIPAL3Q6P499 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 AL035685.1-201ENST00000636663 812 ntBASIC20.42■□□□□ 0.86
NIPAL3Q6P499 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NIPAL3Q6P499 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 C1orf229-201ENST00000623686 2258 ntBASIC20.41■□□□□ 0.86
NIPAL3Q6P499 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NIPAL3Q6P499 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NIPAL3Q6P499 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
NIPAL3Q6P499 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
NIPAL3Q6P499 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 MIR4787-201ENST00000607364 84 ntBASIC20.39■□□□□ 0.85
NIPAL3Q6P499 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NIPAL3Q6P499 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.38■□□□□ 0.85
NIPAL3Q6P499 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NIPAL3Q6P499 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
NIPAL3Q6P499 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NIPAL3Q6P499 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.38■□□□□ 0.85
NIPAL3Q6P499 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NIPAL3Q6P499 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NIPAL3Q6P499 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
NIPAL3Q6P499 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NIPAL3Q6P499 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NIPAL3Q6P499 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.37■□□□□ 0.85
NIPAL3Q6P499 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NIPAL3Q6P499 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NIPAL3Q6P499 AC004448.1-201ENST00000458332 883 ntBASIC20.37■□□□□ 0.85
NIPAL3Q6P499 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NIPAL3Q6P499 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NIPAL3Q6P499 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NIPAL3Q6P499 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 EP400NL-214ENST00000641289 2402 ntBASIC20.36■□□□□ 0.85
NIPAL3Q6P499 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.36■□□□□ 0.85
NIPAL3Q6P499 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 CLDN5-201ENST00000403084 2357 ntBASIC20.35■□□□□ 0.85
NIPAL3Q6P499 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 SNX5-217ENST00000606557 1087 ntBASIC20.35■□□□□ 0.85
NIPAL3Q6P499 AC092028.1-203ENST00000608262 953 ntBASIC20.35■□□□□ 0.85
NIPAL3Q6P499 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.35■□□□□ 0.85
NIPAL3Q6P499 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms